Pre_GI: BLASTN Hits

Some Help

Query: CU928160:256932 Escherichia coli IAI1 chromosome, complete genome

Start: 256932, End: 278639, Length: 21708

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome013590BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome013580BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome08613BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome08613BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome08613BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome04807BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome02674BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome02617BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome02254BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome02206BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome02200BLASTN svgBLASTP svg
NC_011740:14947961494796152042525630Escherichia fergusonii ATCC 35469, complete genome02125BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome02040BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome01945BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome01861BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome01628BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome01620BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome01441BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome01441BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome01441BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,01009BLASTN svgBLASTP svg
NC_011751:17141311714131174129427164Escherichia coli UMN026 chromosome, complete genome0779BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome0735BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome0718BLASTN svgBLASTP svg
CU928145:41319244131924415503823115Escherichia coli 55989 chromosome, complete genome3e-129470BLASTN svgBLASTP svg
NC_011748:41319244131924415503823115Escherichia coli 55989, complete genome3e-129470BLASTN svgBLASTP svg
NC_009801:40739684073968409617422207Escherichia coli E24377A, complete genome7e-127462BLASTN svgBLASTP svg
CP002516:119935*11993514694827014Escherichia coli KO11, complete genome3e-120440BLASTN svgBLASTP svg
CP002185:39645003964500398613821639Escherichia coli W, complete genome3e-120440BLASTN svgBLASTP svg
NC_010468:111504*11150413814926646Escherichia coli ATCC 8739, complete genome1e-116428BLASTN svgBLASTP svg
AP010958:4707712*4707712472598018269Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-100375BLASTN svgBLASTP svg
NC_011740:29865142986514300959323080Escherichia fergusonii ATCC 35469, complete genome5e-66260BLASTN svgBLASTP svg
NC_009800:3787320*3787320380985222533Escherichia coli HS, complete genome5e-57230BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome3e-49204BLASTN svgBLASTP svg
NC_020063:31040003104000312597921980Enterobacteriaceae bacterium strain FGI 57, complete genome2e-47198BLASTN svgBLASTP svg
NC_008563:15778791577879160172323845Escherichia coli APEC O1, complete genome3e-46194BLASTN svgBLASTP svg
NC_007946:15866561586656161278726132Escherichia coli UTI89, complete genome3e-46194BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome1e-45192BLASTN svgBLASTP svg
NC_004431:17131411713141173884125701Escherichia coli CFT073, complete genome3e-43184BLASTN svgBLASTP svg
NC_012912:2901021*2901021292518824168Dickeya zeae Ech1591, complete genome3e-43184BLASTN svgBLASTP svg
NC_020063:20772332077233210134824116Enterobacteriaceae bacterium strain FGI 57, complete genome6e-41176BLASTN svgBLASTP svg
NC_009792:4017510*4017510404823430725Citrobacter koseri ATCC BAA-895, complete genome6e-41176BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome4e-33151BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-30141BLASTN svgBLASTP svg
NC_014532:35960973596097363859942503Halomonas elongata DSM 2581, complete genome3e-27131BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome2e-25125BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome2e-25125BLASTN svgBLASTP svg
NC_015968:4117835*4117835416711149277Enterobacter asburiae LF7a chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome3e-24121BLASTN svgBLASTP svg
NC_011080:33312133312135949426374Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-23119BLASTN svgBLASTP svg
NC_013421:57961579617736519405Pectobacterium wasabiae WPP163, complete genome2e-22115BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome8e-22113BLASTN svgBLASTP svg
NC_011149:30955630955633763728082Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-21111BLASTN svgBLASTP svg
NC_003197:33208633208635504122956Salmonella typhimurium LT2, complete genome3e-21111BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-20107BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome5e-20107BLASTN svgBLASTP svg
NC_013421:11435001143500116948625987Pectobacterium wasabiae WPP163, complete genome5e-20107BLASTN svgBLASTP svg
NC_013421:55319355319358079227600Pectobacterium wasabiae WPP163, complete genome5e-20107BLASTN svgBLASTP svg
NC_013592:14245601424560145021625657Dickeya dadantii Ech586, complete genome2e-19105BLASTN svgBLASTP svg
NC_010102:27623042762304278909926796Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1799.6BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str5e-1797.6BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1695.6BLASTN svgBLASTP svg
NC_006511:25405002540500256809927600Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-1695.6BLASTN svgBLASTP svg
NC_005126:34965834965840029550638Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-1281.8BLASTN svgBLASTP svg
NC_015563:33494233494235315818217Delftia sp. Cs1-4 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011149:31870223187022321200624985Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0971.9BLASTN svgBLASTP svg
NC_006511:3079512*3079512310454825037Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-0971.9BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_012913:1832500*1832500186405931560Aggregatibacter aphrophilus NJ8700, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004631:3112043*3112043313711225070Salmonella enterica subsp. enterica serovar Typhi Ty2, complete6e-0763.9BLASTN svgBLASTP svg
NC_003198:3126548*3126548315161725070Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-0763.9BLASTN svgBLASTP svg
NC_015138:21101492110149213484224694Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_002505:15078601507860152884320984Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete3e-0661.9BLASTN svgBLASTP svg