Pre_GI: BLASTN Hits

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Query: CU928160:145276 Escherichia coli IAI1 chromosome, complete genome

Start: 145276, End: 164777, Length: 19502

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome037720BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome037630BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome037630BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome037630BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome037590BLASTN svgBLASTP svg
CP002516:3949061*3949061396781618756Escherichia coli KO11, complete genome031800BLASTN svgBLASTP svg
NC_010473:118681*11868113863819958Escherichia coli str. K-12 substr. DH10B, complete genome023720BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome023720BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome023720BLASTN svgBLASTP svg
NC_011750:156799*15679917601919221Escherichia coli IAI39 chromosome, complete genome022380BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome013210BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome013200BLASTN svgBLASTP svg
NC_008563:149709*14970917318423476Escherichia coli APEC O1, complete genome012280BLASTN svgBLASTP svg
NC_007946:149733*14973317320823476Escherichia coli UTI89, complete genome012280BLASTN svgBLASTP svg
NC_004431:153907*15390717771123805Escherichia coli CFT073, complete genome012200BLASTN svgBLASTP svg
NC_008253:149693*14969317261122919Escherichia coli 536, complete genome012070BLASTN svgBLASTP svg
NC_011740:165363*16536318914823786Escherichia fergusonii ATCC 35469, complete genome03691BLASTN svgBLASTP svg
NC_013961:2861949*2861949288466722719Erwinia amylovora, complete genome1e-112414BLASTN svgBLASTP svg
NC_010694:96238396238398280120419Erwinia tasmaniensis, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1075.8BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome2e-0661.9BLASTN svgBLASTP svg