Pre_GI: BLASTP Hits

Some Help

Query: CU928160:3030324:3052623 Escherichia coli IAI1 chromosome, complete genome

Start: 3052623, End: 3053390, Length: 768

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EpaR9e-145512
NC_011741:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR9e-145512
AP010958:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EpaR9e-145512
NC_009801:3175714:319800931980093198776768Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaR1e-143508
NC_013364:3552284:357458735745873575354768Escherichia coli O111:H- str. 11128, complete genometype III secretion protein EpaR9e-143506
NC_013361:3867558:388985638898563890623768Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EpaR9e-143506
CP002516:903241:913892913892914659768Escherichia coli KO11, complete genometype III secretion protein SpaR/YscT/HrcT1e-142505
CP002185:3167738:319141731914173192184768Escherichia coli W, complete genometype III secretion system protein1e-142505
NC_011415:3217796:324009432400943240861768Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein1e-142505
NC_016902:903241:913892913892914659768Escherichia coli KO11FL chromosome, complete genometype III secretion protein SpaR/YscT/HrcT1e-142505
NC_010468:906957:917613917613918380768Escherichia coli ATCC 8739, complete genometype III secretion protein SpaR/YscT/HrcT2e-139494
NC_009800:2995958:302064530206453021412768Escherichia coli HS, complete genometype III secretion apparatus protein EpaR2e-139494
NC_011751:3285646:330819233081923308959768Escherichia coli UMN026 chromosome, complete genomeputative type III secretion protein EpaR4e-138490
CU928145:3196173:321850832185083219275768Escherichia coli 55989 chromosome, complete genomeputative Type III secretion protein EpaR8e-138489
NC_011748:3196173:321850832185083219275768Escherichia coli 55989, complete genomeputative Type III secretion protein EpaR8e-138489
NC_011353:3805819:382867738286773829144468Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-77289
NC_002655:3769643:379158537915853792037453Escherichia coli O157:H7 EDL933, complete genometype III secretion apparatus protein1e-77289
NC_016831:2867766:289451428945142895305792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)9e-48190
NC_011294:2890500:291725029172502918041792Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein9e-48190
NC_011274:2881306:290805429080542908845792Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein9e-48190
NC_011205:3050235:307698730769873077778792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT9e-48190
NC_011147:2814664:284266228426622843453792Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence secretory protein9e-48190
NC_006511:2819128:284712628471262847917792Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsecretory protein (associated with virulence)9e-48190
NC_011080:2982346:300909430090943009885792Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT9e-48190
NC_011149:2912219:294111629411162941907792Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT9e-48190
NC_003197:3005842:303259030325903033381792Salmonella typhimurium LT2, complete genomeneedle complex export protein9e-48190
NC_010102:2967464:299557229955722996363792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-48190
NC_012125:2938519:296650129665012967292792Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence associated secretory protein9e-48190
NC_016810:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system secretory apparatus9e-48190
NC_016856:3026426:305282730528273053618792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein9e-48190
NC_016857:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein9e-48190
NC_016860:3029272:305602030560203056811792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein SpaR/YscT/HrcT9e-48190
NC_016863:2974333:300108030010803001871792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein9e-48190
NC_017046:3027161:305390630539063054697792Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system secretory apparatus9e-48190
NC_011094:2913500:293978629397862940577792Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT1e-47189
NC_015761:2726000:275218927521892752980792Salmonella bongori NCTC 12419, complete genomevirulence associated secretory protein1e-47189
NC_016832:2829767:285774628577462858537792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaR3e-47188
NC_004631:2842453:287044728704472871238792Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein3e-47188
NC_003198:2856596:288459028845902885381792Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)3e-47188
NC_006905:2960260:298611829861182986909792Salmonella enterica subsp. enterica serovar Choleraesuis strsurface presentation of antigens; secretory proteins1e-46186
NC_002655:3769643:379127037912703791506237Escherichia coli O157:H7 EDL933, complete genomeputative integral membrane protein-component of typeIII secretion apparatus7e-35147
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus5e-29127
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR2e-27123
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-27123
NC_010694:2138000:215439321543932155121729Erwinia tasmaniensis, complete genomeType III secretion apparatus1e-26120
NC_011353:3805819:382836238283623828556195Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-26119
NC_012214:2221702:224179622417962242566771Erwinia pyrifoliae Ep1/96, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus1e-25117
NC_013722:1689125:172499717249971725767771Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein1e-24113
NC_013971:1660144:168608816860881686858771Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-24112
NC_013961:1622616:164856016485601649330771Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaR2e-24112
NC_020418:14965:275152751528276762Morganella morganii subsp. morganii KT, complete genomeType III secretion inner membrane protein5e-24111
NC_007645:3343815:335798933579893358774786Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscT6e-23107
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein4e-22105
NC_008011:663958:669154669154669969816Lawsonia intracellularis PHE/MN1-00, complete genomeType III secretion component protein SctT2e-2099.8
NC_012660:819381:821326821326822114789Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein1e-1997.1
NC_005126:4423964:443916744391674439955789Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctT4e-1995.1
NC_012962:1189021:119456611945661195354789Photorhabdus asymbiotica, complete genometype iii secretion component protein sctt8e-1994
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT4e-1892
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT4e-1892
NC_002678:5139557:516137151613715162189819Mesorhizobium loti MAFF303099, complete genometranslocation protein in type III secretion system, hrcT2e-1789.4
NC_017249:8283701:828370182837018284522822Bradyrhizobium japonicum USDA 6, complete genomeRhcT protein9e-1684
NC_013941:4470932:450379145037914504567777Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeescT1e-1583.6
NC_013364:3701895:374769437476943748470777Escherichia coli O111:H- str. 11128, complete genomeputative T3SS structure protein EscT1e-1583.6
NC_013008:4643825:467543246754324676208777Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor1e-1583.6
NC_011353:4688000:471939147193914720167777Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein SpaR/YscT/HrcT1e-1583.6
NC_002695:4584177:461628746162874617063777Escherichia coli O157:H7 str. Sakai, complete genomeEscT1e-1583.6
NC_002655:4653160:468527046852704686046777Escherichia coli O157:H7 EDL933, complete genomeescT1e-1583.6
NC_011094:1435347:146355914635591464338780Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT2e-1583.2
NC_016831:1236786:126502812650281265807780Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein2e-1583.2
NC_003198:1621347:162629616262961627075780Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein2e-1582.8
NC_011080:1470794:149909514990951499874780Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT2e-1582.8
NC_010102:1616530:162147916214791622126648Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1582.8
NC_011205:1852665:185761418576141858393780Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT3e-1582.4
NC_011294:1723852:172880117288011729580780Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein3e-1582.4
NC_012125:2360815:236576423657642366543780Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein3e-1582.4
NC_010067:1507823:151635415163541517133780Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1582.4
NC_011149:1710601:171555017155501716329780Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT2e-1582.4
NC_011601:4096427:413005341300534130829777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscT4e-1582
NC_003197:1471349:149965514996551500434780Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein6e-1581.3
NC_016856:1481325:150963115096311510410780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein6e-1581.3
NC_016860:1469066:149734214973421498121780Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein6e-1581.3
NC_016863:1429516:145782214578221458601780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein6e-1581.3
AP010958:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscT5e-1581.3
NC_013353:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscT5e-1581.3
NC_013361:5319497:533690553369055337681777Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscT5e-1581.3
NC_011147:1502096:150704515070451507824780Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein9e-1580.9
NC_006511:1506915:151186415118641512643780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein9e-1580.9
NC_011274:1763676:176862517686251769404780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein1e-1480.5
NC_007435:566436:587396587396588214819Burkholderia pseudomallei 1710b chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT5e-1478.2
NC_009075:1906915:192599819259981926816819Burkholderia pseudomallei 668 chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT5e-1478.2
NC_006351:1886475:190716619071661907984819Burkholderia pseudomallei K96243 chromosome 2, complete sequencetype III secretion-associated protein5e-1478.2
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein3e-1065.9
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB1e-0963.5
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir5e-0961.6
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR2e-0859.7
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR2e-0859.7
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR4e-0858.5
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0757
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR1e-0757
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR2e-0756.6
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR2e-0756.2
NC_010688:3487000:350447635044763505306831Xanthomonas campestris pv. campestris, complete genomeHrcT protein4e-0755.1
NC_007086:3582500:359973635997363600566831Xanthomonas campestris pv. campestris str. 8004, complete genomeHrpB8 protein4e-0755.1
NC_003902:1442705:144321114432111444041831Xanthomonas campestris pv. campestris str. ATCC 33913, completeHrpB8 protein4e-0755.1
NC_017271:1517820:151829615182961519126831Xanthomonas campestris pv. raphani 756C chromosome, completetype III secretion protein HrcT4e-0755.1
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR6e-0754.7
NC_011772:1575674:159722015972201597981762Bacillus cereus G9842, complete genomeflagellar biosynthetic protein FliR7e-0754.7
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein8e-0754.3
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR1e-0653.9
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR1e-0653.9
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0653.9
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB1e-0653.5
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB2e-0652.8
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR2e-0652.8
NC_007508:479799:482317482317483147831Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeHrcT protein2e-0652.8
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein3e-0652.4
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR3e-0652.4
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR6e-0651.2