Pre_GI: BLASTP Hits

Some Help

Query: CU928160:1232510:1240014 Escherichia coli IAI1 chromosome, complete genome

Start: 1240014, End: 1240745, Length: 732

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2786000:279893827989382799669732Escherichia coli KO11FL chromosome, complete genomeMerR family transcriptional regulator8e-141499
AC_000091:1191353:121490512149051215636732Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator8e-141499
NC_010468:2699000:271231327123132713044732Escherichia coli ATCC 8739, complete genometranscriptional regulator, MerR family8e-141499
CP002185:1298675:130617913061791306910732Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator8e-141499
CU928145:1300863:130836713083671309098732Escherichia coli 55989 chromosome, complete genomeputative DNA-binding transcriptional regulator8e-141499
NC_000913:1188999:121255112125511213282732Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator8e-141499
NC_011748:1300863:130836713083671309098732Escherichia coli 55989, complete genomeputative DNA-binding transcriptional regulator8e-141499
CP002516:2786000:279893827989382799669732Escherichia coli KO11, complete genometranscriptional regulator, MerR family8e-141499
NC_010473:1245284:125279212527921253523732Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator8e-141499
NC_009800:1254409:126054612605461261277732Escherichia coli HS, complete genometranscriptional regulator mlrA8e-141499
NC_013364:1477248:150816915081691508900732Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator8e-141499
NC_013361:1634226:164035616403561641087732Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator8e-141499
NC_013353:1339263:134676713467671347498732Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator8e-141499
NC_012759:1093764:110127211012721102003732Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator8e-141499
NC_011741:1232510:124001412400141240745732Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator8e-141499
NC_010658:1193225:120299012029901203721732Shigella boydii CDC 3083-94, complete genometranscriptional regulator mlrA8e-141499
AP010958:1339263:134676713467671347498732Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA-binding transcriptional regulator8e-141499
NC_011750:1978801:198996919899691990700732Escherichia coli IAI39 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-140497
NC_010498:1995500:200765220076522008383732Escherichia coli SMS-3-5, complete genometranscriptional regulator mlrA3e-140497
NC_013941:1460144:146559714655971466328732Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator mlrA3e-140497
NC_009801:1296488:130399213039921304723732Escherichia coli E24377A, complete genometranscriptional regulator mlrA homolog2e-140497
NC_011415:1273551:128105512810551281786732Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator2e-140497
NC_011751:1446073:145959314595931460324732Escherichia coli UMN026 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-140496
NC_012967:1205985:121348912134891214220732Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator9e-140495
NC_012947:2566754:258016725801672580898732Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeMerR family transcriptional regulator9e-140495
NC_008563:1217804:122696012269601227691732Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-139494
NC_007946:1280508:128966412896641290395732Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YcgE2e-139494
NC_011742:1221416:123057212305721231303732Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional regulator2e-139494
NC_011745:1287714:129563412956341296365732Escherichia coli ED1a chromosome, complete genomeputative DNA-binding transcriptional regulator2e-139494
NC_004431:1443968:145311814531181453849732Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ycgE5e-139493
NC_008253:1228485:123630212363021237033732Escherichia coli 536, complete genomehypothetical transcriptional regulator YcgE5e-139493
NC_011601:1315746:132239113223911323122732Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator8e-139492
NC_020063:2230000:224297722429772243729753Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator2e-109394
NC_013716:1618249:163244816324481633206759Citrobacter rodentium ICC168, complete genomeMerR-family transcriptional regulator2e-88325
NC_020260:1111130:111503111150311115774744Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-63243
NC_009778:1070000:107294310729431073686744Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-63243
NC_006856:95830:119643119643120368726Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator1e-40166
NC_015968:74124:788537885379578726Enterobacter asburiae LF7a chromosome, complete genomeMerR family transcriptional regulator3e-40165
NC_011274:1763676:179301017930101793738729Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-39162
NC_016831:1236786:124069412406941241422729Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator3e-39162
NC_011080:1470794:147470114747011475429729Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, MerR family protein2e-39162
NC_011094:1435347:143922714392271439955729Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, MerR family protein3e-39161
NC_011294:1723852:175318617531861753914729Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator3e-39161
NC_011147:1502096:153149015314901532218729Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator5e-39161
NC_016863:1429516:143342714334271434155729Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein7e-39160
NC_016857:1428201:143211214321121432840729Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74MerR family transcriptional regulator7e-39160
NC_016856:1481325:148523614852361485964729Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein7e-39160
NC_016810:1428201:143211214321121432840729Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator7e-39160
NC_011083:1476894:148077514807751481503729Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, MerR family protein9e-39160
NC_017046:1428272:143218314321831432911729Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator7e-39160
NC_003197:1471349:147526014752601475988729Salmonella typhimurium LT2, complete genomeputative regulatory protein6e-39160
NC_016860:1469066:147294714729471473675729Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein6e-39160
NC_006511:1506915:153630915363091537037729Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator6e-39160
NC_010102:1616530:164592516459251646653729Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-39160
NC_004631:1325817:132972713297271330455729Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator6e-39160
NC_016832:1324820:132870013287001329428729Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator, MerR6e-39160
NC_006905:1509093:151300315130031513731729Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory proteins, merR family2e-38159
NC_012125:2360815:239014923901492390877729Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-38159
NC_015761:1181186:122550712255071226355849Salmonella bongori NCTC 12419, complete genometranscriptional regulator1e-26119
NC_011205:1852665:188199918819991882241243Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1994
NC_008027:896000:917822917822918691870Pseudomonas entomophila L48, complete genometranscriptional regulator, MerR family1e-1893.6
NC_013960:243884:264587264587265531945Nitrosococcus halophilus Nc4 chromosome, complete genomeregulatory protein MerR4e-1685.1
NC_011205:1852665:188225618822561882726471Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1066.6
NC_000918:465627:479863479863480273411Aquifex aeolicus VF5, complete genometranscriptional regulator (MerR family)2e-0859.3
NC_010678:642769:657655657655658620966Ralstonia pickettii 12J chromosome 2, complete sequencetranscriptional regulator, MerR family1e-0756.6
NC_012857:1097400:112253311225331123498966Ralstonia pickettii 12D chromosome 2, complete genometranscriptional regulator, MerR family1e-0756.6
NC_015942:787808:788499788499788966468Acidithiobacillus ferrivorans SS3 chromosome, complete genomeMerR family transcriptional regulator3e-0755.5
NC_014623:8648000:865312286531228654015894Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeb12 binding domain/transcriptional regulator9e-0753.9
NC_009483:3024115:304686830468683047221354Geobacter uraniireducens Rf4 chromosome, complete genomeMerR family transcriptional regulator1e-0653.9
NC_014561:153143:551455146278765Pantoea vagans C9-1 plasmid pPag1, complete sequenceHTH-type transcriptional regulator mlrA3e-0652.4
NC_013792:109203:115508115508115993486Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencemercuric resistance operon regulatory protein MerR3e-0652.4
NC_019673:1656680:167013016701301670567438Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0652.4
NC_015690:6521740:652174065217406522726987Paenibacillus mucilaginosus KNP414 chromosome, complete genomeregulatory protein MerR3e-0652.4
NC_014623:8648000:865414386541438655006864Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeMerR family transcriptional regulator4e-0652
NC_010645:369408:369408369408370397990Bordetella avium 197N, complete genomeMerR-family transcriptional regulator5e-0651.6
NC_014355:139324:1582571582571593601104Candidatus Nitrospira defluvii, complete genomeputative MerR family regulatory protein8e-0650.8
NC_008609:2446246:248378824837882484156369Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, MerR family8e-0650.8
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator9e-0650.4