Pre_GI: BLASTN Hits

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Query: CP002797:4656327 Escherichia coli NA114, complete genome

Start: 4656327, End: 4680716, Length: 24390

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002695:5381576*5381576540611824543Escherichia coli O157:H7 str. Sakai, complete genome015560BLASTN svgBLASTP svg
CP002516:41991334199133422817229040Escherichia coli KO11, complete genome013420BLASTN svgBLASTP svg
CP002185:47918114791811481779025980Escherichia coli W, complete genome013420BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome013410BLASTN svgBLASTP svg
NC_000913:45282784528278455238424107Escherichia coli K12, complete genome013040BLASTN svgBLASTP svg
AC_000091:45349354534935455904124107Escherichia coli W3110 DNA, complete genome013040BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome012870BLASTN svgBLASTP svg
NC_011751:50705975070597508906918473Escherichia coli UMN026 chromosome, complete genome012840BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome012800BLASTN svgBLASTP svg
NC_010498:49306494930649495591925271Escherichia coli SMS-3-5, complete genome012680BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome012660BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome012480BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome012480BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome011120BLASTN svgBLASTP svg
NC_010473:46303614630361465014819788Escherichia coli str. K-12 substr. DH10B, complete genome08776BLASTN svgBLASTP svg
NC_009801:48826844882684490824525562Escherichia coli E24377A, complete genome07914BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome07581BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome07573BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome07525BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome05537BLASTN svgBLASTP svg
NC_009800:4529504*4529504454809918596Escherichia coli HS, complete genome05533BLASTN svgBLASTP svg
AP010958:52728635272863529459921737Escherichia coli O103:H2 str. 12009 DNA, complete genome05533BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome05449BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome05402BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome05364BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome03120BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome02726BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome01542BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01437BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome0995BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome0965BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome0854BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome0823BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome0799BLASTN svgBLASTP svg
NC_010498:48991674899167492274523579Escherichia coli SMS-3-5, complete genome0775BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome4e-98367BLASTN svgBLASTP svg
NC_002695:53525545352554537663924086Escherichia coli O157:H7 str. Sakai, complete genome4e-98367BLASTN svgBLASTP svg
NC_002655:53825575382557540664224086Escherichia coli O157:H7 EDL933, complete genome4e-98367BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome2e-84321BLASTN svgBLASTP svg
NC_012880:10914861091486111695125466Dickeya dadantii Ech703, complete genome2e-32149BLASTN svgBLASTP svg
NC_006155:15673061567306159029622991Yersinia pseudotuberculosis IP 32953, complete genome4e-27131BLASTN svgBLASTP svg
NC_003143:14412111441211146223121021Yersinia pestis CO92, complete genome9e-25123BLASTN svgBLASTP svg
NC_004088:31869543186954320951322560Yersinia pestis KIM, complete genome9e-25123BLASTN svgBLASTP svg
NC_005810:14133051413305143757924275Yersinia pestis biovar Microtus str. 91001, complete genome9e-25123BLASTN svgBLASTP svg
NC_008149:30229703022970304559922630Yersinia pestis Nepal516, complete genome9e-25123BLASTN svgBLASTP svg
NC_010159:15580001558000157786119862Yersinia pestis Angola, complete genome9e-25123BLASTN svgBLASTP svg
NC_010465:30469043046904306991523012Yersinia pseudotuberculosis YPIII, complete genome9e-25123BLASTN svgBLASTP svg
NC_010634:15657881565788158879323006Yersinia pseudotuberculosis PB1/+, complete genome9e-25123BLASTN svgBLASTP svg
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-23117BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-19105BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007384:33839833383983340296018978Shigella sonnei Ss046, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1489.7BLASTN svgBLASTP svg
NC_014933:81496481496483469719734Bacteroides helcogenes P 36-108 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str5e-1177.8BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_014121:36275883627588367459947012Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_015963:11717811717814980332626Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008253:29650029650032229825799Escherichia coli 536, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008563:31192843119284314330124018Escherichia coli APEC O1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009792:32259653225965324431718353Citrobacter koseri ATCC BAA-895, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:1117325*1117325114343626112Erwinia pyrifoliae Ep1/96, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015566:1206500*1206500124185935360Serratia sp. AS12 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015567:1206727*1206727124209935373Serratia sp. AS9 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010498:48560114856011487626620256Escherichia coli SMS-3-5, complete genome5e-0867.9BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008563:318993*31899336258343591Escherichia coli APEC O1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg