Pre_GI: BLASTN Hits

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Query: AP010958:4707712 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 4707712, End: 4725980, Length: 18269

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009801:40739684073968409617422207Escherichia coli E24377A, complete genome012320BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome01178BLASTN svgBLASTP svg
NC_013282:116649*11664913955822910Cronobacter turicensis, complete genome01239BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome06242BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome06581BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome06694BLASTN svgBLASTP svg
NC_009800:3787320*3787320380985222533Escherichia coli HS, complete genome08294BLASTN svgBLASTP svg
CU928145:41319244131924415503823115Escherichia coli 55989 chromosome, complete genome08532BLASTN svgBLASTP svg
NC_011748:41319244131924415503823115Escherichia coli 55989, complete genome08532BLASTN svgBLASTP svg
NC_010498:3988351*3988351401846830118Escherichia coli SMS-3-5, complete genome010250BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome08958BLASTN svgBLASTP svg
NC_010468:111504*11150413814926646Escherichia coli ATCC 8739, complete genome08825BLASTN svgBLASTP svg
CP002516:119935*11993514694827014Escherichia coli KO11, complete genome08810BLASTN svgBLASTP svg
CP002185:39645003964500398613821639Escherichia coli W, complete genome08810BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome2e-164587BLASTN svgBLASTP svg
NC_020260:38365003836500386459928100Cronobacter sakazakii Sp291, complete genome5e-140505BLASTN svgBLASTP svg
NC_009778:38320003832000386183229833Enterobacter sakazakii ATCC BAA-894, complete genome7e-133482BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome1e-100375BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome1e-100375BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome1e-100375BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome1e-84321BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome1e-84321BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome1e-84321BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome6e-84319BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome7e-65256BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome7e-62246BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome7e-59236BLASTN svgBLASTP svg
NC_015224:4473230*4473230449714523916Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-54222BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome2e-43184BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-22113BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete4e-1797.6BLASTN svgBLASTP svg
NC_013416:1748848*1748848176691818071Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_009832:110239*11023913543725199Serratia proteamaculans 568, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_013172:783097*78309780703523939Brachybacterium faecium DSM 4810, complete genome5e-0763.9BLASTN svgBLASTP svg