Pre_GI: BLASTP Hits

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Query: AP010958:922937:927712 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 927712, End: 928179, Length: 468

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:928486:933261933261933728468Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional regulator4e-85312
NC_013353:922937:927712927712928179468Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator of mntH4e-85312
NC_015954:2764919:280424728042472804924678Halophilic archaeon DL31 chromosome, complete genomeDtxR family iron (metal) dependent repressor8e-0752.8
NC_013410:2037840:205849220584922058926435Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DtxR family iron (metal) dependent repressor7e-1786.3
NC_018720:357716:362611362611363312702Bifidobacterium asteroides PRL2011 chromosome, complete genomeDtxR family transcriptional regulator1e-0755.8
NC_003552:4277937:427936842793684279850483Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-1272.4
NC_013741:27353:417484174842329582Archaeoglobus profundus DSM 5631, complete genomeiron (metal) dependent repressor, DtxR family2e-1271.6
NC_015172:1471501:150546215054621505839378Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-0962.4
NC_014212:670996:673613673613674317705Meiothermus silvanus DSM 9946 chromosome, complete genomeiron (metal) dependent repressor, DtxR family6e-0753.1
NC_014363:114239:156802156802157224423Olsenella uli DSM 7084 chromosome, complete genomeiron (metal) dependent repressor, DtxR family7e-0649.7
NC_013204:1759985:177898117789811779364384Eggerthella lenta DSM 2243, complete genomeiron (metal) dependent repressor, DtxR family2e-1478.2
NC_014219:2491021:250366525036652504102438Bacillus selenitireducens MLS10 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-1272.4
NC_015385:456000:476559476559476933375Treponema succinifaciens DSM 2489 chromosome, complete genomeiron (metal) dependent repressor, DtxR family7e-1063.2
NC_015555:211935:229660229660230130471Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeiron (metal) dependent repressor, DtxR family2e-0961.6
NC_015519:801929:801929801929802411483Tepidanaerobacter sp. Re1 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-0858.9
NC_015499:1790186:179550217955021796221720Thermodesulfobium narugense DSM 14796 chromosome, complete genomeiron (metal) dependent repressor, DtxR family8e-0752.8
NC_015574:806762:820865820865821323459Methanobacterium sp. SWAN-1 chromosome, complete genomeiron (metal) dependent repressor, DtxR family7e-1269.7
NC_010001:1488000:150772215077221508087366Clostridium phytofermentans ISDg, complete genomeiron (metal) dependent repressor, DtxR family8e-0959.3
NC_008554:4586543:461032446103244610857534Syntrophobacter fumaroxidans MPOB, complete genomeiron (metal) dependent repressor, DtxR family8e-0752.8
NC_014378:4428:204002040020885486Acetohalobium arabaticum DSM 5501 chromosome, complete genomeiron (metal) dependent repressor, DtxR family7e-1269.7
NC_008148:672608:686182686182686865684Rubrobacter xylanophilus DSM 9941, complete genomeiron (metal) dependent repressor, DtxR family7e-0752.8
NC_013203:1447340:146155614615561461984429Atopobium parvulum DSM 20469, complete genomeiron (metal) dependent repressor, DtxR family1e-0652.4
NC_008698:903759:922126922126922572447Thermofilum pendens Hrk 5, complete genomeiron dependent repressor2e-1374.7
NC_009253:2927802:294803529480352948469435Desulfotomaculum reducens MI-1 chromosome, complete genomeiron dependent repressor5e-1063.5
NC_002936:67896:923739237393089717Dehalococcoides ethenogenes 195, complete genomeiron dependent repressor, putative4e-1167
NC_003901:1568000:159004015900401590489450Methanosarcina mazei Go1, complete genomeIron-dependent repressor5e-0650.1
NC_009699:1698951:171819717181971718556360Clostridium botulinum F str. Langeland chromosome, complete genomeiron-dependent repressor2e-0962
NC_016788:527351:535848535848536462615Corynebacterium diphtheriae HC04 chromosome, complete genomeiron-dependent repressor ideR6e-0650.1
NC_016783:537717:550061550061550675615Corynebacterium diphtheriae INCA 402 chromosome, complete genomeiron-dependent repressor ideR6e-0649.7
NC_016782:537412:545910545910546524615Corynebacterium diphtheriae 241 chromosome, complete genomeiron-dependent repressor ideR6e-0650.1
NC_016786:533537:545881545881546495615Corynebacterium diphtheriae HC01 chromosome, complete genomeiron-dependent repressor ideR6e-0650.1
NC_012471:1197534:123296812329681233348381Streptococcus equi subsp. equi 4047, complete genomeiron-dependent repressor protein4e-0960.5
NC_009485:1604942:164018716401871640612426Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport regulator MntR2e-25114
NC_014532:2989185:300928430092843009694411Halomonas elongata DSM 2581, complete genomemanganese transport regulator MntR3e-23107
NC_012883:104987:122828122828123253426Thermococcus sibiricus MM 739, complete genomeManganese-dependent transcription regulator5e-1373.2
NC_013928:174500:178504178504179157654Streptococcus mutans NN2025, complete genomemetal-dependent transcriptional regulator5e-0650.1
NC_014408:1193239:121558712155871215982396Methanothermobacter marburgensis str. Marburg chromosome, completemetal-dependent transcriptional regulator3e-0857.4
NC_013165:2240377:224037722403772240811435Slackia heliotrinireducens DSM 20476, complete genomeMn-dependent transcriptional regulator1e-0858.5
NC_003551:154883:170934170934171410477Methanopyrus kandleri AV19, complete genomeMn-dependent transcriptional regulator3e-1063.9
NC_017297:1700000:171833017183301718689360Clostridium botulinum F str. 230613 chromosome, complete genomeputative iron-dependent repressor2e-0962
NC_012658:1658505:167473416747341675096363Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative iron-dependent repressor7e-0959.7
NC_014328:3747973:375371137537113754181471Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative metal dependent transcriptional regulator2e-1167.8
NC_016048:2873669:288808128880812888506426Oscillibacter valericigenes Sjm18-20, complete genomeputative transcriptional regulator5e-0856.6