Pre_GI: BLASTP Hits

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Query: AP010958:4313462:4333390 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 4333390, End: 4334790, Length: 1401

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:4566779:4586949458694945883491401Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate decarboxylase0973
NC_013353:4313462:4333390433339043347901401Escherichia coli O103:H2 str. 12009, complete genomeglutamate decarboxylase A, PLP-dependent0973
NC_012967:3549880:3595671359567135970711401Escherichia coli B str. REL606 chromosome, complete genomeglutamate decarboxylase A, PLP-dependent0973
NC_009800:3685651:3707491370749137088911401Escherichia coli HS, complete genomeglutamate decarboxylase GadA0973
NC_000913:3624826:3664203366420336656031401Escherichia coli K12, complete genomeglutamate decarboxylase A, PLP-dependent0973
NC_011748:3983432:4031288403128840326881401Escherichia coli 55989, complete genomeglutamate decarboxylase A, PLP-dependent0973
CU928145:3983432:4031288403128840326881401Escherichia coli 55989 chromosome, complete genomeglutamate decarboxylase A, PLP-dependent0973
NC_004337:3590323:3695528369552836969281401Shigella flexneri 2a str. 301, complete genomeglutamate decarboxylase isozyme0971
NC_008258:1750964:1769570176957017709701401Shigella flexneri 5 str. 8401, complete genomeglutamate decarboxylase isozyme0967
NC_002695:2091890:2091890209189020932901401Escherichia coli O157:H7 str. Sakai, complete genomeglutamate decarboxylase isozyme0966
NC_007613:1533024:1554856155485615562561401Shigella boydii Sb227, complete genomeglutamate decarboxylase isozyme0966
NC_009801:1678790:1680481168048116818811401Escherichia coli E24377A, complete genomeglutamate decarboxylase GadB0966
NC_010498:1659328:1680092168009216814921401Escherichia coli SMS-3-5, complete genomeglutamate decarboxylase GadA0966
AP010958:1711656:1713347171334717147471401Escherichia coli O103:H2 str. 12009 DNA, complete genomeglutamate decarboxylase B, PLP-dependent0966
NC_004741:1792442:1807985180798518093851401Shigella flexneri 2a str. 2457T, complete genomeglutamate decarboxylase isozyme0966
NC_011353:2004800:2006491200649120078911401Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeglutamate decarboxylase0966
NC_013353:1711656:1713347171334717147471401Escherichia coli O103:H2 str. 12009, complete genomeglutamate decarboxylase B, PLP-dependent0966
NC_013361:2047170:2048861204886120502611401Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate decarboxylase0966
NC_013364:1902761:1904452190445219058521401Escherichia coli O111:H- str. 11128, complete genomeglutamate decarboxylase0966
NC_013941:1894496:1896187189618718975871401Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglutamate decarboxylase beta0966
NC_010658:1593137:1594828159482815962281401Shigella boydii CDC 3083-94, complete genomeglutamate decarboxylase GadB0964
NC_004431:1754627:1756318175631817577871470Escherichia coli CFT073, complete genomeGlutamate decarboxylase beta0964
NC_016822:1781644:1800442180044218018421401Shigella sonnei 53G, complete genomeglutamate decarboxylase0963
NC_011740:1595381:1613670161367016150701401Escherichia fergusonii ATCC 35469, complete genomeglutamate decarboxylase B, PLP-dependent0956
NC_011740:2859933:2883597288359728849971401Escherichia fergusonii ATCC 35469, complete genomeglutamate decarboxylase A, PLP-dependent0947
NC_015224:3892972:3909568390956839109681401Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,glutamate decarboxylase0843
NC_008800:4013298:4032296403229640336961401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,glutamate decarboxylase0833
NC_005071:523423:5262825262825277211440Prochlorococcus marinus str. MIT 9313, complete genomeGlutamate decarboxylase9e-149526
NC_008601:1811327:1822118182211818234641347Francisella tularensis subsp. novicida U112, complete genomeglutamate decarboxylase3e-146518
NC_009257:78291:8558585585869311347Francisella tularensis subsp. tularensis WY96-3418 chromosome,glutamate decarboxylase5e-145514
NC_006570:1794832:1807573180757318089191347Francisella tularensis subsp. tularensis Schu 4, complete genomeglutamate decarboxylase2e-144512
NC_008245:1794629:1807370180737018087161347Francisella tularensis subsp. tularensis FSC 198, complete genomeglutamate decarboxylase2e-144512
NC_016933:1870558:1883299188329918846451347Francisella tularensis TIGB03 chromosome, complete genomeGlutamate decarboxylase2e-144512
NC_016937:1794651:1807392180739218087381347Francisella tularensis subsp. tularensis TI0902 chromosome,glutamate decarboxylase2e-144512
NC_015696:486250:4919754919754930901116Francisella sp. TX077308 chromosome, complete genomeglutamate decarboxylase1e-121436
NC_007880:1780702:1793853179385317949741122Francisella tularensis subsp. holarctica, complete genomeglutamate decarboxylase4e-119428
NC_009380:4944183:4951026495102649524261401Salinispora tropica CNB-440 chromosome, complete genomeglutamate decarboxylase6e-113408
NC_015859:3346473:3362573336257333639671395Corynebacterium variabile DSM 44702 chromosome, complete genomeglutamate decarboxylase5e-110398
NC_016894:377446:3846103846103860221413Acetobacterium woodii DSM 1030 chromosome, complete genomeglutamate decarboxylase Gad1e-104380
NC_009749:1776600:178975317897531790664912Francisella tularensis subsp. holarctica FTA, complete genomeglutamate decarboxylase2e-102373
NC_003155:4441559:4457596445759644589601365Streptomyces avermitilis MA-4680, complete genomeglutamate decarboxylase7e-89328
NC_008497:79144:8148981489829281440Lactobacillus brevis ATCC 367, complete genomeGlutamate decarboxylase1e-81303
NC_017328:2586171:259489125948912595376486Shigella flexneri 2002017 chromosome, complete genomehypothetical protein8e-28125
NC_008258:2542863:255173025517302552215486Shigella flexneri 5 str. 8401, complete genomehypothetical protein8e-28125
NC_000961:828416:8464348464348475851152Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-1996.7
NC_013849:1396051:1399365139936514004561092Ferroglobus placidus DSM 10642 chromosome, complete genomePyridoxal-dependent decarboxylase9e-1995.1
NC_000868:1168819:1169643116964311707971155Pyrococcus abyssi GE5, complete genomegroup ii decarboxylase2e-1894.4
NC_003413:1107965:1107965110796511090801116Pyrococcus furiosus DSM 3638, complete genomegroup II decarboxylase2e-1894
NC_014640:5897421:5905688590568859071181431Achromobacter xylosoxidans A8 chromosome, complete genomeaminotransferase class V8e-1789
NC_011529:1554500:1575839157583915769901152Thermococcus onnurineus NA1, complete genomeglutamate decarboxylase5e-1686.3
NC_000854:1:1392513925153191395Aeropyrum pernix K1, complete genomeputative pyridoxal-dependent decarboxylase1e-1584.7
NC_013440:4235489:4240515424051542420591545Haliangium ochraceum DSM 14365, complete genomePyridoxal-dependent decarboxylase1e-1584.7
NC_012804:2017531:2022388202238820235391152Thermococcus gammatolerans EJ3, complete genomeL-tyrosine decarboxylase (mfnA)1e-1584.7
NC_003901:1568000:1568868156886815700641197Methanosarcina mazei Go1, complete genomeL-tyrosine decarboxylase1e-1584.7
NC_016885:1732257:1741246174124617425921347Pyrobaculum oguniense TE7 chromosome, complete genomeglutamate decarboxylase-related PLP-dependent protein2e-1480.9
NC_018000:1914945:1936660193666019379161257Sinorhizobium fredii USDA 257 chromosome, complete genomeL-tyrosine decarboxylase MfnA2e-1480.5
NC_016051:1429800:1431252143125214324061155Thermococcus sp. AM4 chromosome, complete genomeL-tyrosine decarboxylase2e-1377.4
NC_007722:55558:7123871238724761239Erythrobacter litoralis HTCC2594, complete genomeputative sphingosine-1-phosphate lyase3e-1377
NC_002678:5020000:5027871502787150289801110Mesorhizobium loti MAFF303099, complete genomehistidine decarboxylase1e-0862
NC_004337:2548288:255752625575262557738213Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-0860.1
NC_004741:2526421:253565925356592535871213Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-0860.1
NC_009749:1776600:179063917906391790872234Francisella tularensis subsp. holarctica FTA, complete genomeglutamate decarboxylase7e-0858.9
NC_009749:1776600:178956917895691789778210Francisella tularensis subsp. holarctica FTA, complete genomeglutamate decarboxylase2e-0757.8
NC_007880:1780702:179366917936691793878210Francisella tularensis subsp. holarctica, complete genomehypothetical protein2e-0757.8
NC_002939:1866651:1870600187060018722581659Geobacter sulfurreducens PCA, complete genomegroup II decarboxylase2e-0654.3