Pre_GI: BLASTP Hits

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Query: AP010958:3669500:3678871 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 3678871, End: 3679755, Length: 885

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspF7e-108390
NC_013716:3109700:314688131468813147786906Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspF1e-70266
NC_013941:4470932:447674944767494477513765Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeespF3e-67255
NC_013361:5319497:536404553640455364668624Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspF2e-66252
NC_013008:4643825:464840246484024649148747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector4e-62238
NC_002695:4584177:458925745892574590003747Escherichia coli O157:H7 str. Sakai, complete genomeEspF4e-62238
NC_002655:4653160:465824046582404658986747Escherichia coli O157:H7 EDL933, complete genomeespF4e-62238
NC_013364:3701895:372061137206113721399789Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspF6e-53207
NC_011601:4096427:410327141032714103891621Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLEE-encoded effector EspF4e-51201
NC_011353:4688000:469236146923614692798438Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspF9e-29127
NC_002655:2730659:2744768274476827459221155Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U2e-0757
NC_013941:2425233:243933924393392440211873Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTir-cytoskeleton coupling protein2e-0756.6
NC_013008:2561586:2576142257614225771551014Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeTir-cytoskeleton coupling protein (TccP)3e-0755.8
NC_002695:2655445:2669551266955126705641014Escherichia coli O157:H7 str. Sakai, complete genomeEspF-like protein3e-0755.8
NC_011353:1195179:121414312141431214895753Escherichia coli O157:H7 str. EC4115 chromosome, complete genome8e-0651.2