Pre_GI: BLASTN Hits

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Query: AC_000091:3180275 Escherichia coli W3110 DNA, complete genome

Start: 3180275, End: 3199621, Length: 19347

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010473:3273882*3273882329673222851Escherichia coli str. K-12 substr. DH10B, complete genome037940BLASTN svgBLASTP svg
NC_000913:3176000*3176000319898722988Escherichia coli K12, complete genome037940BLASTN svgBLASTP svg
NC_010468:69494369494371914224200Escherichia coli ATCC 8739, complete genome024360BLASTN svgBLASTP svg
NC_011750:36837603683760370613422375Escherichia coli IAI39 chromosome, complete genome024110BLASTN svgBLASTP svg
NC_011748:35299303529930355057820649Escherichia coli 55989, complete genome022660BLASTN svgBLASTP svg
CU928145:35299303529930355057820649Escherichia coli 55989 chromosome, complete genome022660BLASTN svgBLASTP svg
CP002185:3393813*3393813341586022048Escherichia coli W, complete genome022660BLASTN svgBLASTP svg
CU928160:32632483263248328331520068Escherichia coli IAI1 chromosome, complete genome022560BLASTN svgBLASTP svg
NC_009801:35114443511444352932517882Escherichia coli E24377A, complete genome020330BLASTN svgBLASTP svg
CP002516:69370369370371389120189Escherichia coli KO11, complete genome020310BLASTN svgBLASTP svg
NC_009800:3224575*3224575324521620642Escherichia coli HS, complete genome013650BLASTN svgBLASTP svg
AP010958:37879913787991381070122711Escherichia coli O103:H2 str. 12009 DNA, complete genome010490BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome02644BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome02640BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome02640BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome02640BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome02639BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome02639BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome02639BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence02625BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome02609BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome02607BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome02599BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome02595BLASTN svgBLASTP svg
NC_007384:3151344*3151344317840127058Shigella sonnei Ss046, complete genome02593BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome02591BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome02587BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome02585BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome02585BLASTN svgBLASTP svg
NC_007613:41197714119771413859918829Shigella boydii Sb227, complete genome02585BLASTN svgBLASTP svg
NC_004741:41605004160500418981229313Shigella flexneri 2a str. 2457T, complete genome02583BLASTN svgBLASTP svg
NC_010658:1193225*1193225121671123487Shigella boydii CDC 3083-94, complete genome02575BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome02575BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome02567BLASTN svgBLASTP svg
NC_010658:1772994*1772994179509922106Shigella boydii CDC 3083-94, complete genome02565BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome02561BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome02559BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome02559BLASTN svgBLASTP svg
NC_010658:15931371593137161115518019Shigella boydii CDC 3083-94, complete genome02553BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome02553BLASTN svgBLASTP svg
NC_008258:35505003550500357858028081Shigella flexneri 5 str. 8401, complete genome02543BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02531BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome02484BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome02458BLASTN svgBLASTP svg
NC_007613:1353500*1353500137891925420Shigella boydii Sb227, complete genome02454BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome02387BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome02321BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome02298BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome02298BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome02226BLASTN svgBLASTP svg
NC_010498:16593281659328168149222165Escherichia coli SMS-3-5, complete genome02194BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome02194BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome02194BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence02131BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome02054BLASTN svgBLASTP svg
NC_010498:32913443291344332017728834Escherichia coli SMS-3-5, complete genome01629BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome01596BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence01483BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome01400BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome01400BLASTN svgBLASTP svg
NC_011750:18495611849561187012520565Escherichia coli IAI39 chromosome, complete genome01302BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome01275BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence0916BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome0874BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome0743BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome2e-167597BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome4e-159569BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome2e-154553BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence9e-151541BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome8e-139502BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome8e-139502BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome2e-108400BLASTN svgBLASTP svg
NC_009649:948719487111709922229Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,6e-44186BLASTN svgBLASTP svg
NC_007384:307013*30701333111524103Shigella sonnei Ss046, complete genome1e-38168BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-32147BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome3e-27131BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome3e-27131BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome7e-22113BLASTN svgBLASTP svg
NC_011002:70319470319475464351450Burkholderia cenocepacia J2315 chromosome 3, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_007651:1620000*1620000165256732568Burkholderia thailandensis E264 chromosome I, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_007651:17264721726472175232825857Burkholderia thailandensis E264 chromosome I, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome4e-1177.8BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008740:87611587611590015424040Marinobacter aquaeolei VT8, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1075.8BLASTN svgBLASTP svg
NC_000907:15688671568867160375334887Haemophilus influenzae Rd KW20, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015740:40724154072415409719824784Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete9e-0969.9BLASTN svgBLASTP svg
NC_013416:15883691588369161218823820Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014121:16826381682638172492542288Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,2e-0661.9BLASTN svgBLASTP svg
NC_004129:5204500*5204500522581521316Pseudomonas fluorescens Pf-5, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014752:197000*19700022735630357Neisseria lactamica ST-640, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014377:1897857*1897857192617728321Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome9e-0660BLASTN svgBLASTP svg
NC_015593:15876841587684160559917916Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete9e-0660BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete9e-0660BLASTN svgBLASTP svg
NC_001263:132288*13228815896226675Deinococcus radiodurans R1 chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg