Pre_GI: BLASTN Hits

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Query: AC_000091:303719 Escherichia coli W3110 DNA, complete genome

Start: 303719, End: 326471, Length: 22753

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000913:303719*30371932647122753Escherichia coli K12, complete genome044800BLASTN svgBLASTP svg
CP002516:1165726*1165726119130025575Escherichia coli KO11, complete genome02480BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome02480BLASTN svgBLASTP svg
CP002185:2919752*2919752294461024859Escherichia coli W, complete genome02480BLASTN svgBLASTP svg
NC_008258:1076922*1076922110024923328Shigella flexneri 5 str. 8401, complete genome02472BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome02464BLASTN svgBLASTP svg
NC_010468:40594364059436408235622921Escherichia coli ATCC 8739, complete genome02456BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome02456BLASTN svgBLASTP svg
NC_009801:30138383013838304465430817Escherichia coli E24377A, complete genome02442BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome02440BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome02440BLASTN svgBLASTP svg
NC_008258:2905413*2905413292427518863Shigella flexneri 5 str. 8401, complete genome02432BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome02432BLASTN svgBLASTP svg
NC_004741:2741971*2741971276422322253Shigella flexneri 2a str. 2457T, complete genome02385BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome02343BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome02044BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome01988BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01848BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome02480BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome02480BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome02480BLASTN svgBLASTP svg
NC_010473:27994827994830350723560Escherichia coli str. K-12 substr. DH10B, complete genome043450BLASTN svgBLASTP svg
NC_011751:348000*34800037070122702Escherichia coli UMN026 chromosome, complete genome016470BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome016350BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome016050BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome016040BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome016000BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome015180BLASTN svgBLASTP svg
NC_008563:318993*31899336258343591Escherichia coli APEC O1, complete genome014140BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome09327BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome09327BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome02488BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome02488BLASTN svgBLASTP svg
NC_000913:1087062*1087062110699919938Escherichia coli K12, complete genome02488BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome02488BLASTN svgBLASTP svg
NC_010468:2809125*2809125282748818364Escherichia coli ATCC 8739, complete genome02488BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome02488BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome02575BLASTN svgBLASTP svg
NC_020260:19933441993344201786024517Cronobacter sakazakii Sp291, complete genome2e-179636BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome3e-163583BLASTN svgBLASTP svg
NC_012214:2221702*2221702227363551934Erwinia pyrifoliae Ep1/96, complete genome1e-162581BLASTN svgBLASTP svg
NC_008253:29650029650032229825799Escherichia coli 536, complete genome3e-154553BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome7e-152545BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome4e-144519BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome6e-143515BLASTN svgBLASTP svg
NC_006905:40115440115443134930196Salmonella enterica subsp. enterica serovar Choleraesuis str3e-123450BLASTN svgBLASTP svg
NC_003197:36743036743038660919180Salmonella typhimurium LT2, complete genome2e-118434BLASTN svgBLASTP svg
NC_011083:40302240302245026847247Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-118432BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome3e-114420BLASTN svgBLASTP svg
NC_021066:37694053769405379116821764Raoultella ornithinolytica B6, complete genome3e-111410BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome6e-109402BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-109402BLASTN svgBLASTP svg
NC_009786:43331433316409920769Escherichia coli E24377A plasmid pETEC_80, complete sequence4e-104387BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-102379BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome5e-97363BLASTN svgBLASTP svg
NC_009792:80833280833283532926998Citrobacter koseri ATCC BAA-895, complete genome5e-97363BLASTN svgBLASTP svg
NC_020181:42194142194144800526065Enterobacter aerogenes EA1509E, complete genome5e-97363BLASTN svgBLASTP svg
NC_008253:20567342056734207917122438Escherichia coli 536, complete genome1e-94355BLASTN svgBLASTP svg
NC_007946:21554542155454218077025317Escherichia coli UTI89, complete genome1e-94355BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome8e-93349BLASTN svgBLASTP svg
NC_002128:35000350006549030491Escherichia coli O157:H7 str. Sakai plasmid pO157, complete5e-88333BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence5e-88333BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome5e-88333BLASTN svgBLASTP svg
NC_020064:1409596*1409596145680247207Serratia marcescens FGI94, complete genome7e-87329BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome7e-84319BLASTN svgBLASTP svg
NC_015567:1206727*1206727124209935373Serratia sp. AS9 chromosome, complete genome2e-71278BLASTN svgBLASTP svg
NC_015566:1206500*1206500124185935360Serratia sp. AS12 chromosome, complete genome2e-71278BLASTN svgBLASTP svg
NC_010102:44778364477836450325125416Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,6e-69270BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-64254BLASTN svgBLASTP svg
NC_004631:4661000*4661000468421223213Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-64254BLASTN svgBLASTP svg
NC_006511:44654954465495449196526471Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-64254BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome3e-64254BLASTN svgBLASTP svg
NC_006905:4486433*4486433450919922767Salmonella enterica subsp. enterica serovar Choleraesuis str2e-62248BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence2e-62248BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome3e-61244BLASTN svgBLASTP svg
NC_011149:44740124474012449847024459Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-60240BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome8e-53216BLASTN svgBLASTP svg
NC_020211:16210001621000164274521746Serratia marcescens WW4, complete genome3e-49204BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome7e-47196BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome1e-42182BLASTN svgBLASTP svg
NC_004547:1970686*1970686199651325828Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-42180BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome6e-38167BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome6e-38167BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome6e-38167BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-34155BLASTN svgBLASTP svg
NC_003198:28565962856596290597449379Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-30141BLASTN svgBLASTP svg
NC_004631:28721922872192289431722126Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-30141BLASTN svgBLASTP svg
NC_006511:28191282819128287100051873Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-30141BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome6e-29137BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome6e-29137BLASTN svgBLASTP svg
NC_014532:988351*988351100759919249Halomonas elongata DSM 2581, complete genome1e-26129BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_012912:48339048339052576442375Dickeya zeae Ech1591, complete genome2e-19105BLASTN svgBLASTP svg
NC_011149:29122192912219296814855930Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-18101BLASTN svgBLASTP svg
NC_006905:29878632987863300811020248Salmonella enterica subsp. enterica serovar Choleraesuis str3e-18101BLASTN svgBLASTP svg
NC_010067:1655815*1655815168162625812Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-1797.6BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome2e-1695.6BLASTN svgBLASTP svg
CU928145:2973968*2973968299959925632Escherichia coli 55989 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010468:1130000*1130000115350023501Escherichia coli ATCC 8739, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011748:2973968*2973968299959925632Escherichia coli 55989, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015663:18690001869000191219543196Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003197:3005842*3005842306162755786Salmonella typhimurium LT2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010102:24954412495441251396918529Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1489.7BLASTN svgBLASTP svg
NC_010102:29674642967464302271055247Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1489.7BLASTN svgBLASTP svg
NC_011080:29823462982346303624053895Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1489.7BLASTN svgBLASTP svg
NC_011083:30097603009760303011220353Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1489.7BLASTN svgBLASTP svg
NC_011751:3048490*3048490309200343514Escherichia coli UMN026 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011080:61042861042863159921172Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-1487.7BLASTN svgBLASTP svg
NC_003198:598000*59800061851020511Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1385.7BLASTN svgBLASTP svg
NC_004631:23663352366335238728320949Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1385.7BLASTN svgBLASTP svg
NC_009801:2898426*2898426294876250337Escherichia coli E24377A, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome7e-1383.8BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_006511:2251022*2251022227421723196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1281.8BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str3e-1281.8BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-1281.8BLASTN svgBLASTP svg
NC_011149:58889558889560977120877Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1281.8BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011083:654479*65447967531220834Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1179.8BLASTN svgBLASTP svg
NC_003197:60604860604862559319546Salmonella typhimurium LT2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-1177.8BLASTN svgBLASTP svg
NC_010465:3431500*3431500345664825149Yersinia pseudotuberculosis YPIII, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_003197:17536631753663177609922437Salmonella typhimurium LT2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003197:1945858*1945858197472828871Salmonella typhimurium LT2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1075.8BLASTN svgBLASTP svg
NC_004631:16235111623511164614622636Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1075.8BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-1075.8BLASTN svgBLASTP svg
NC_010102:11372471137247116298725741Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-1075.8BLASTN svgBLASTP svg
NC_011080:17500001750000177244622447Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-1075.8BLASTN svgBLASTP svg
NC_011083:1993672*1993672201930525634Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1075.8BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome7e-1073.8BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome7e-1073.8BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002655:22647732264773228824723475Escherichia coli O157:H7 EDL933, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002695:17946351794635181624421610Escherichia coli O157:H7 str. Sakai, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013421:55319355319358079227600Pectobacterium wasabiae WPP163, complete genome3e-0971.9BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006905:17660001766000178860222603Salmonella enterica subsp. enterica serovar Choleraesuis str4e-0867.9BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010995:1459831*1459831148209922269Cellvibrio japonicus Ueda107, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010995:32356232356236441540854Cellvibrio japonicus Ueda107, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010995:44604134460413448409523683Cellvibrio japonicus Ueda107, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010995:45251194525119455888733769Cellvibrio japonicus Ueda107, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011080:1944226*1944226198035236127Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-0867.9BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-0867.9BLASTN svgBLASTP svg
NC_013716:31097003109700314990540206Citrobacter rodentium ICC168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012880:37486653748665378917040506Dickeya dadantii Ech703, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009648:32244953224495325660032106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020181:96959996959999375524157Enterobacter aerogenes EA1509E, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015663:44479844447984447024622263Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg