Pre_GI: BLASTN Hits

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Query: AC_000091:2872000 Escherichia coli W3110 DNA, complete genome

Start: 2872000, End: 2896526, Length: 24527

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010473:29639512963951298843424484Escherichia coli str. K-12 substr. DH10B, complete genome048210BLASTN svgBLASTP svg
NC_000913:28734432873443289220118759Escherichia coli K12, complete genome036870BLASTN svgBLASTP svg
NC_009800:28899282889928291209922172Escherichia coli HS, complete genome028930BLASTN svgBLASTP svg
NC_010468:1029471*1029471105499125521Escherichia coli ATCC 8739, complete genome028230BLASTN svgBLASTP svg
NC_013850:985331985331100742022090Klebsiella variicola At-22 chromosome, complete genome02434BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome0932BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-46194BLASTN svgBLASTP svg
NC_009092:15995261599526164486445339Shewanella loihica PV-4, complete genome3e-40174BLASTN svgBLASTP svg
NC_007984:22103022103024292321894Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete4e-39170BLASTN svgBLASTP svg
NC_016002:2946702*2946702299376147060Pseudogulbenkiania sp. NH8B, complete genome2e-32149BLASTN svgBLASTP svg
NC_021150:1258780*1258780127736818589Azotobacter vinelandii CA6, complete genome4e-27131BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome4e-27131BLASTN svgBLASTP svg
NC_018419:22600022600024809922100Secondary endosymbiont of Ctenarytaina eucalypti chromosome,1e-26129BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome6e-26127BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-23119BLASTN svgBLASTP svg
NC_007963:19089641908964193444325480Chromohalobacter salexigens DSM 3043, complete genome1e-23119BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome2e-19105BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome3e-18101BLASTN svgBLASTP svg
NC_009831:36122063612206365403941834Shewanella sediminis HAW-EB3, complete genome1e-1799.6BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome5e-1797.6BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome5e-1797.6BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome8e-1693.7BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-1693.7BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009831:35838563583856360600922154Shewanella sediminis HAW-EB3, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_020302:2829484*2829484285153022047Corynebacterium halotolerans YIM 70093 = DSM 44683, complete8e-1693.7BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013166:96143196143198377922349Kangiella koreensis DSM 16069, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014532:15794191579419162013440716Halomonas elongata DSM 2581, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome3e-1281.8BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008699:4443000*4443000447766734668Nocardioides sp. JS614, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014816:24462362446236249509148856Asticcacaulis excentricus CB 48 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_012704:19791831979183200242723245Corynebacterium kroppenstedtii DSM 44385, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011206:25491322549132259129842167Acidithiobacillus ferrooxidans ATCC 53993, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014666:40432794043279406262719349Frankia sp. EuI1c chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002977:92558892558894955323966Methylococcus capsulatus str. Bath, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008726:47253894725389475038925001Mycobacterium vanbaalenii PYR-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013422:16041571604157162347719321Halothiobacillus neapolitanus c2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011059:18965931896593192809931507Prosthecochloris aestuarii DSM 271, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014318:73336887333688735759923912Amycolatopsis mediterranei U32 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020126:5777895*5777895579916621272Myxococcus stipitatus DSM 14675, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg