Pre_GI: BLASTP Hits

Some Help

Query: AC_000091:4472000:4477494 Escherichia coli W3110 DNA, complete genome

Start: 4477494, End: 4477889, Length: 396

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010473:4564590:457264545726454573040396Escherichia coli str. K-12 substr. DH10B, complete genomepredicted mRNA endoribonuclease2e-73273
NC_000913:4462782:447083744708374471232396Escherichia coli K12, complete genomepredicted mRNA endoribonuclease2e-73273
NC_012967:4449576:445609144560914456486396Escherichia coli B str. REL606 chromosome, complete genomeputative mRNA endoribonuclease9e-73271
NC_012947:3947238:395762239576223958017396Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP9e-73271
NC_011742:4795733:480224848022484802643396Escherichia coli S88 chromosome, complete genomemRNA endoribonuclease2e-72270
NC_010498:4821519:482803448280344828429396Escherichia coli SMS-3-5, complete genomeendoribonuclease L-PSP family protein4e-72269
NC_010658:4494103:450647745064774506872396Shigella boydii CDC 3083-94, complete genomeendoribonuclease L-PSP family protein2e-71267
NC_007613:4217557:424919142491914249586396Shigella boydii Sb227, complete genomehypothetical protein1e-70264
NC_011149:1578451:158904115890411589430390Salmonella enterica subsp. enterica serovar Agona str. SL483,endoribonuclease L-PSP family protein6e-60229
NC_003197:1611302:162600516260051626394390Salmonella typhimurium LT2, complete genomeputative translation initiation inhibitor6e-60229
NC_016810:1576636:158285815828581583247390Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-60229
NC_016856:1621279:163598216359821636371390Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative translation initiation inhibitor6e-60229
NC_016860:1614280:162369516236951624084390Salmonella enterica subsp. enterica serovar Typhimurium strendoribonuclease L-PSP family protein6e-60229
NC_016863:1575488:158417315841731584562390Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative translation initiation inhibitor6e-60229
NC_016857:1576636:158285815828581583319462Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative translation initiation inhibitor4e-60229
NC_017046:1574057:158274215827421583158417Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-60229
NC_015761:1488807:150350915035091503898390Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-59227
NC_009436:3807420:382036738203673820762396Enterobacter sp. 638, complete genomeendoribonuclease L-PSP4e-58223
NC_009668:1591290:159437815943781594770393Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceendoribonuclease L-PSP2e-57220
NC_020181:1653261:166517216651721665573402Enterobacter aerogenes EA1509E, complete genomeprobable translation initiation inhibitor protein1e-54211
NC_015663:3742738:375266437526643753065402Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-54210
NC_016612:5208936:522213152221315222526396Klebsiella oxytoca KCTC 1686 chromosome, complete genomeendoribonuclease L-PSP family protein3e-42170
NC_011094:1584038:159345315934531593779327Salmonella enterica subsp. enterica serovar Schwarzengrund strendoribonuclease L-PSP7e-42168
NC_011283:1811000:188610318861031886492390Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein2e-41167
NC_011992:863174:876370876370876777408Acidovorax ebreus TPSY, complete genomeEndoribonuclease L-PSP4e-34143
NC_008313:886248:911312911312911713402Ralstonia eutropha H16 chromosome 1, complete sequenceputative translation initiation inhibitor, yjgF family4e-1993.6
NC_010512:110932:130333130333130731399Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP6e-1992.8
NC_007974:138176:150604150604151227624Ralstonia metallidurans CH34 chromosome 2, complete sequenceEndoribonuclease L-PSP2e-1580.9
NC_007348:2519447:254236525423652542763399Ralstonia eutropha JMP134 chromosome 2, complete sequenceEndoribonuclease L-PSP4e-1580.1
NC_003296:1665569:166827616682761668713438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein8e-1579
NC_003296:1696958:169846616984661698903438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN8e-1579
NC_020829:4390417:440964644096464410062417Pseudomonas denitrificans ATCC 13867, complete genomeendoribonuclease L-PSP9e-1579
NC_021066:839734:843254843254843466213Raoultella ornithinolytica B6, complete genometranslation initiation inhibitor, yjgF family protein3e-1270.5
NC_010172:1199725:120944312094431209829387Methylobacterium extorquens PA1, complete genomeEndoribonuclease L-PSP2e-1167.8
NC_011757:1246000:127379612737961274182387Methylobacterium chloromethanicum CM4, complete genomeEndoribonuclease L-PSP3e-1167
NC_014640:2693060:270855427085542708949396Achromobacter xylosoxidans A8 chromosome, complete genomeendoribonuclease L-PSP family protein5e-1063.2
NC_010645:1341475:136079613607961361197402Bordetella avium 197N, complete genomeendoribonuclease8e-1062.4
NC_014210:5309121:531140453114045311829426Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Endoribonuclease L-PSP9e-1062.4
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease1e-0962
NC_016935:1365463:139792113979211398301381Paenibacillus mucilaginosus 3016 chromosome, complete genomeendoribonuclease L-PSP3e-0960.8
NC_015690:3941113:397856539785653978864300Paenibacillus mucilaginosus KNP414 chromosome, complete genomeendoribonuclease L-PSP3e-0960.8
NC_015277:5211779:523113752311375231598462Sphingobacterium sp. 21 chromosome, complete genomeEndoribonuclease L-PSP5e-0959.7
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP7e-0959.3
NC_015496:2155816:216533021653302165776447Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeEndoribonuclease L-PSP2e-0858.2
NC_010623:1961685:201993020199302020382453Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP2e-0858.2
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP1e-0858.2
NC_012982:2415237:243796724379672438374408Hirschia baltica ATCC 49814, complete genomeEndoribonuclease L-PSP3e-0857.4
NC_003112:673772:689773689773690162390Neisseria meningitidis MC58, complete genomeputative ribonuclease4e-0857
NC_010120:609323:631641631641632030390Neisseria meningitidis 053442, complete genomeribonuclease, putative4e-0857
NC_008767:613394:634500634500634889390Neisseria meningitidis FAM18, complete genomehypothetical protein4e-0857
NC_013016:571255:589884589884590273390Neisseria meningitidis alpha14 chromosome, complete genometranslation initiation inhibitor4e-0857
NC_017501:1680075:168249516824951682884390Neisseria meningitidis 8013, complete genomeputative endoribonuclease4e-0857
NC_017505:670919:691717691717692106390Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein4e-0857
NC_017513:618500:642487642487642876390Neisseria meningitidis G2136 chromosome, complete genomeendoribonuclease L-PSP4e-0857
NC_017514:1568591:156925115692511569640390Neisseria meningitidis M01-240149 chromosome, complete genomeendoribonuclease L-PSP4e-0857
NC_017516:1613762:161442216144221614811390Neisseria meningitidis H44/76 chromosome, complete genomeendoribonuclease L-PSP4e-0857
NC_017518:743955:765382765382765771390Neisseria meningitidis NZ-05/33 chromosome, complete genomeendoribonuclease L-PSP4e-0857
NC_017515:1601954:160261416026141603003390Neisseria meningitidis M04-240196 chromosome, complete genomeendoribonuclease L-PSP3e-0857
NC_010170:2374852:237607623760762376462387Bordetella petrii, complete genomeputative translational inhibitor5e-0856.6
NC_016860:4024000:404045640404564040836381Salmonella enterica subsp. enterica serovar Typhimurium strtranslation initiation inhibitor9e-0855.5
NC_017517:703811:719695719695720084390Neisseria meningitidis M01-240355 chromosome, complete genomeendoribonuclease L-PSP1e-0755.5
NC_020411:114683:138539138539138919381Hydrogenobaculum sp. HO, complete genomeendoribonuclease L-PSP2e-0754.7
NC_015587:114684:138540138540138920381Hydrogenobaculum sp. SHO chromosome, complete genomeendoribonuclease L-PSP2e-0754.7
NC_015557:114648:138504138504138884381Hydrogenobaculum sp. 3684 chromosome, complete genomeendoribonuclease L-PSP2e-0754.7
NC_003296:1696958:170337917033791703756378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0754.3
NC_003296:1665569:167318916731891673566378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0754.3
NC_007948:360199:369335369335369733399Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP3e-0753.9
NC_008701:391216:401455401455401829375Pyrobaculum islandicum DSM 4184, complete genomeputative endoribonuclease L-PSP7e-0752.8
NC_020126:7451894:745891074589107459344435Myxococcus stipitatus DSM 14675, complete genomeendoribonuclease L-PSP2e-0651.6
NC_013132:7204082:7226261722626172280031743Chitinophaga pinensis DSM 2588, complete genomeEndoribonuclease L-PSP4e-0650.1
NC_012880:3645304:364843836484383648830393Dickeya dadantii Ech703, complete genomeEndoribonuclease L-PSP4e-0650.1