Pre_GI: BLASTP Hits

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Query: AC_000091:273325:296605 Escherichia coli W3110 DNA, complete genome

Start: 296605, End: 297015, Length: 411

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000913:272071:296605296605297015411Escherichia coli K12, complete genomepredicted transcriptional regulator2e-66250
NC_013361:313540:334008334008334418411Escherichia coli O26:H11 str. 11368 chromosome, complete genome3e-65246
NC_011415:308825:328321328321328731411Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-64244
NC_011748:299080:311773311773312183411Escherichia coli 55989, complete genomeputative transcriptional regulator1e-64244
CU928145:299080:311773311773312183411Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator1e-64244
NC_002655:301940:323657323657324556900Escherichia coli O157:H7 EDL933, complete genomeputative LysR-like transcriptional regulator2e-53206
NC_011353:305820:327536327536328435900Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeLysR family transcriptional regulator2e-53206
NC_013008:306953:328848328848329747900Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLysR family transcriptional regulator2e-53206
NC_013941:338121:364629364629365528900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysR family transcriptional regulator2e-53206
NC_002695:301939:323656323656324405750Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-53205
NC_014924:3334386:334797133479713348876906Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometranscriptional regulator, LysR family2e-31134
NC_007760:3655433:366105536610553661948894Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LysR family3e-24110
NC_005363:3562205:356761135676113568513903Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein5e-1683.2
NC_004578:1719849:173823617382361739129894Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, LysR family1e-1375.5
NC_012988:347500:352999352999353895897Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator2e-1374.7
NC_016612:477407:490855490855491748894Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator7e-1372.8
NC_007005:4515853:451824745182474519140894Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding6e-1372.8
NC_002488:1638946:168523016852301686171942Xylella fastidiosa 9a5c, complete genometranscriptional regulator (LysR family)8e-1372.4
NC_004431:364000:392279392279393247969Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ycjZ2e-1271.2
NC_007946:289425:327751327751328719969Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YcjZ2e-1271.2
NC_008563:318993:329341329341330309969Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-1271.2
NC_011742:291237:317116317116318084969Escherichia coli S88 chromosome, complete genometranscriptional regulator, lysR family2e-1271.2
NC_008253:334467:384524384524385417894Escherichia coli 536, complete genomeputative LysR-family transcriptional regulatory protein2e-1271.2
NC_009439:2427120:243808224380822439017936Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-1270.5
NC_011740:2737467:275263027526302753523894Escherichia fergusonii ATCC 35469, complete genomeputative transcriptional regulator, lysR family6e-1269.7
NC_013592:3212834:324177432417743242667894Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family6e-1269.7
NC_010498:301000:333679333679334572894Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator6e-1269.7
NC_011751:348000:360954360954361889936Escherichia coli UMN026 chromosome, complete genomeputative LysR family transcriptional regulator6e-1269.7
NC_016830:3697173:372494337249433725836894Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator6e-1269.3
NC_002516:2436304:244177124417712442691921Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator8e-1269.3
NC_011002:772243:780811780811781758948Burkholderia cenocepacia J2315 chromosome 3, complete sequenceLysR family regulatory protein1e-1168.2
NC_007802:1484641:149382614938261494734909Jannaschia sp. CCS1, complete genometranscriptional regulator, LysR family2e-1167.8
NC_011601:273430:287669287669288562894Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator2e-1167.8
NC_015675:2247960:226732222673222268215894Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLysR family transcriptional regulator3e-1167
NC_012917:3241196:328919132891913290084894Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, LysR family6e-1166.2
NC_014532:2146466:215302521530252153429405Halomonas elongata DSM 2581, complete genometranscriptional regulator, LysR family7e-1165.9
NC_020126:2262049:227526622752662276189924Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator7e-1165.9
NC_003295:199354:227886227886228788903Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN1e-1065.1
NC_014539:743523:758850758850759758909Burkholderia sp. CCGE1003 chromosome 1, complete sequenceLysR family transcriptional regulator1e-1065.1
NC_002488:1638946:167066016706601671634975Xylella fastidiosa 9a5c, complete genometranscriptional regulator (LysR family)2e-1064.7
NC_010805:530876:553733553733554626894Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator2e-1064.7
NC_010086:1907959:192067819206781921571894Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family2e-1064.7
NC_009255:1071868:109481710948171095710894Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator2e-1064.7
NC_015379:2482901:248816124881612489048888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family2e-1064.3
NC_009832:1280938:129663112966311297542912Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family2e-1064.3
NC_013592:2968500:297601929760192976912894Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family3e-1063.5
NC_016612:5208936:522364852236485224550903Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator5e-1063.2
NC_008687:388262:403185403185404078894Paracoccus denitrificans PD1222 chromosome 2, complete sequencetranscriptional regulator, LysR family7e-1062.8
NC_011757:1121262:113998911399891140882894Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family7e-1062.8
NC_013850:2357608:237356223735622374473912Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family6e-1062.8
NC_007760:3655433:367309536730953674000906Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LysR family9e-1062.4
NC_020181:1653261:167622716762271677126900Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family1e-0962
NC_015663:3742738:374346737434673744366900Enterobacter aerogenes KCTC 2190 chromosome, complete genomeLysR family transcriptional regulator1e-0962
NC_011894:6259649:626388662638866264779894Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family2e-0961.6
NC_008543:2474002:248407824840782484983906Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0961.2
NC_008061:2773670:278202427820242782929906Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0961.2
NC_010515:1900967:190932219093221910227906Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0961.2
NC_014640:3808639:382405038240503824958909Achromobacter xylosoxidans A8 chromosome, complete genomeLysR family transcriptional regulator3e-0960.8
NC_021066:839734:843410843410844372963Raoultella ornithinolytica B6, complete genomeLysR family transcriptional regulator3e-0960.5
NC_010508:1898547:191011119101111911004894Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0959.7
NC_013446:2919005:293742629374262938367942Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family7e-0959.3
NC_008800:3642679:364779436477943648690897Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator9e-0958.9
NC_015224:1067390:109425310942531095149897Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator9e-0958.9
NC_009434:3611738:363308236330823633888807Pseudomonas stutzeri A1501, complete genometranscriptional regulator9e-0958.9
NC_009348:1663870:167351116735111674479969Aeromonas salmonicida subsp. salmonicida A449, complete genomeLysR family transcriptional regulator9e-0958.9
NC_020064:1150982:116030411603041161212909Serratia marcescens FGI94, complete genometranscriptional regulator8e-0958.9
NC_020181:1317647:1337048133704813380701023Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator8e-0958.9
NC_004088:3505383:350932735093273510235909Yersinia pestis KIM, complete genometranscriptional regulator1e-0858.5
NC_003143:875367:879311879311880219909Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_010634:3509880:351384135138413514749909Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator1e-0858.5
NC_008150:513783:540580540580541488909Yersinia pestis Antiqua, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_006155:3596120:360008136000813600989909Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_008149:3373229:337717333771733378081909Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_010159:3448490:345345334534533454361909Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family1e-0858.5
NC_005810:3142384:317050331705033171411909Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator1e-0858.5
NC_009708:1131500:115719311571931158101909Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family substrate binding transcriptional regulator1e-0858.5
NC_014029:1146900:117369811736981174606909Yersinia pestis Z176003 chromosome, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_017154:1089044:111584311158431116751909Yersinia pestis D106004 chromosome, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_017160:1092839:111851511185151119423909Yersinia pestis D182038 chromosome, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_017168:199381:225063225063225971909Yersinia pestis A1122 chromosome, complete genomeLysR-family transcriptional regulatory protein1e-0858.5
NC_017265:1000342:102714310271431028051909Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein1e-0858.5
NC_014311:1545175:155104715510471551979933Ralstonia solanacearum PSI07 chromosome, complete genomeLysR family transcriptional regulator1e-0858.5
NC_010465:1118147:114564811456481146556909Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LysR family1e-0858.2
NC_003047:2798367:280150528015052802389885Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-0858.2
NC_011365:1865687:187089818708981871842945Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator2e-0857.8
NC_014006:3124818:314555131455513146444894Sphingobium japonicum UT26S chromosome 1, complete genomeLysR-family transcriptional regulator2e-0857.4
NC_015379:2505233:253862225386222539527906Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family3e-0857.4
NC_009801:995396:998185998185999093909Escherichia coli E24377A, complete genometranscriptional regulator, LysR family3e-0857.4
NC_009648:1882500:189881918988191899685867Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator3e-0857.4
NC_016845:2655512:267275626727562673664909Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator4e-0857
NC_009439:2427120:243917324391732440075903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator4e-0857
NC_013941:378555:389487389487390476990Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysR family transcriptional regulator5e-0856.2
NC_008752:3684739:370478237047823705693912Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family7e-0856.2
NC_011751:348000:359782359782360771990Escherichia coli UMN026 chromosome, complete genomeputative LysR-like transcriptional regulator8e-0855.8
NC_020829:940692:975956975956976846891Pseudomonas denitrificans ATCC 13867, complete genomeLysR family transcriptional regulator1e-0755.5
NC_010498:301000:332553332553333479927Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator2e-0755.1
NC_011601:273430:286543286543287469927Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional regulator1e-0755.1
NC_011757:1146608:114660811466081147501894Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family1e-0755.1
NC_008253:334467:383398383398384324927Escherichia coli 536, complete genomeputative lysR-family transcriptional regulator1e-0755.1
NC_015379:2482901:248966524896652490570906Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family1e-0755.1
NC_007946:289425:326637326637327626990Escherichia coli UTI89, complete genomeputative LysR-like transcriptional regulator1e-0755.1
NC_004431:364000:391165391165392154990Escherichia coli CFT073, complete genomePutative LysR-like transcriptional regulator1e-0755.1
NC_008563:318993:328227328227329216990Escherichia coli APEC O1, complete genomeputative LysR-like transcriptional regulator1e-0755.1
NC_011742:291237:316002316002316991990Escherichia coli S88 chromosome, complete genomeLysR family transcriptional regulator1e-0755.1
NC_014307:2735934:274823327482332749129897Ralstonia solanacearum CFBP2957 chromosome, complete genomeLysR family transcriptional regulator3e-0753.9
NC_012808:1122341:115155711515571152501945Methylobacterium extorquens AM1, complete genomeTranscriptional regulator, LysR family3e-0753.9
NC_016626:1781956:178195617819561782873918Burkholderia sp. YI23 plasmid byi_1p, complete sequenceLysR family transcriptional regulator4e-0753.5
NC_009832:2460027:247533424753342476263930Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family4e-0753.5
NC_017030:2263268:226956322695632270465903Corallococcus coralloides DSM 2259 chromosome, complete genometranscriptional regulator2C LysR family5e-0753.1
NC_007510:1921251:192674419267441927643900Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0752.8
NC_014306:642152:659268659268660179912Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family9e-0752.4
NC_013421:801542:821850821850822752903Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family1e-0652
NC_017030:2263268:227405622740562274958903Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator1e-0652
NC_008095:2071500:208277220827722083716945Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family1e-0652
NC_010694:1966676:196717319671731968072900Erwinia tasmaniensis, complete genomeLysR-family transcriptional regulator3e-0650.8
NC_011145:3750021:377731237773123778217906Anaeromyxobacter sp. K, complete genometranscriptional regulator, LysR family3e-0650.4
NC_013854:1277106:1277106127710612781221017Azospirillum sp. B510, complete genometranscriptional regulator3e-0650.4
NC_009656:44500:654596545966379921Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator3e-0650.4
NC_013440:811780:834418834418835320903Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, LysR family3e-0650.4
NC_012988:769981:833864833864834748885Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator4e-0650.1
NC_004578:1719849:171984917198491720745897Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, LysR family4e-0650.1
NC_014307:1855356:187981518798151880591777Ralstonia solanacearum CFBP2957 chromosome, complete genome5e-0649.7