Pre_GI: BLASTP Hits

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Query: AC_000091:1627049:1643569 Escherichia coli W3110 DNA, complete genome

Start: 1643569, End: 1643781, Length: 213

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2305659:232379423237942324006213Escherichia coli KO11FL chromosome, complete genomecold-shock protein3e-34143
NC_011751:1859606:187177118717711871983213Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage3e-34143
NC_011750:1565000:157106915710691571281213Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage3e-34143
NC_011740:4520373:452586145258614526073213Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage3e-34143
CU928160:1668842:167987816798781680090213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-34143
CP002516:2305659:232379423237942324006213Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein3e-34143
NC_010473:1712984:172950417295041729716213Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein3e-34143
NC_004431:3040953:305264930526493052861213Escherichia coli CFT073, complete genomeCold shock-like protein cspF3e-34143
CP002185:1770815:178185017818501782062213Escherichia coli W, complete genomeQin prophage; cold shock protein3e-34143
NC_000913:1625500:163987916398791640091213Escherichia coli K12, complete genomeQin prophage; cold shock protein3e-34143
NC_011741:1668842:167987816798781680090213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-34143
NC_011742:4962008:496839449683944968606213Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage3e-34143
NC_012759:1517500:153193815319381532150213Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein3e-34143
NC_013361:2138716:215092921509292151141213Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein3e-34143
NC_013941:5317424:532338853233885323600213Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein7e-34142
NC_010468:2265423:228073722807372280937201Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein5e-32136
NC_006511:1654959:166560016656001665812213Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cold shock protein4e-26116
NC_011147:1650142:166078316607831660995213Salmonella enterica subsp. enterica serovar Paratyphi A strcold shock protein4e-26116
NC_011094:1282385:129748912974891297701213Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-26115
NC_015761:1181186:120922312092231209435213Salmonella bongori NCTC 12419, complete genomecold shock protein2e-25114
NC_010102:1779707:179118217911821791394213Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-25114
NC_003197:1320861:133083213308321331044213Salmonella typhimurium LT2, complete genomecold shock-like protein2e-25114
NC_004631:1182883:119798611979861198198213Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative cold shock protein2e-25114
NC_003198:1771432:178293417829341783146213Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cold shock protein2e-25114
NC_011294:1896168:190764319076431907855213Salmonella enterica subsp. enterica serovar Enteritidis strcold shock protein CspH2e-25114
NC_016810:1276340:128768512876851287897213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein (CspH)2e-25114
NC_016856:1326503:134080713408071341019213Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scold shock-like protein2e-25114
NC_016857:1276340:128768512876851287897213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cold shock protein2e-25114
NC_016860:1317174:132851913285191328731213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein2e-25114
NC_016863:1277652:128899712889971289209213Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1cold shock-like protein2e-25114
NC_012125:2531817:254329325432932543505213Salmonella enterica subsp. enterica serovar Paratyphi C straincold shock protein2e-24110
NC_006905:1342474:136246613624661362678213Salmonella enterica subsp. enterica serovar Choleraesuis strcold shock protein-like protein2e-24110
NC_016612:477407:486391486391486603213Klebsiella oxytoca KCTC 1686 chromosome, complete genomecold shock-like protein CspF2e-22104
NC_015663:4488058:449704244970424497254213Enterobacter aerogenes KCTC 2190 chromosome, complete genomecold shock-like protein CspF4e-22103
NC_009436:2685910:269487826948782695090213Enterobacter sp. 638, complete genomecold-shock DNA-binding protein family protein2e-1271.6
NC_009832:4269804:427489642748964275108213Serratia proteamaculans 568, complete genomecold-shock DNA-binding domain protein7e-1269.3
NC_013421:2306000:231836723183672318579213Pectobacterium wasabiae WPP163, complete genomecold-shock DNA-binding domain protein1e-1168.6
NC_015566:4350080:435925543592554359467213Serratia sp. AS12 chromosome, complete genomecold-shock DNA-binding domain-containing protein3e-1167.4
NC_016816:4232680:424978342497834249995213Pantoea ananatis LMG 5342, complete genomecold shock-like protein3e-1167
NC_009381:1783886:181188818118881812100213Yersinia pestis Pestoides F chromosome, complete genomecold shock protein6e-1166.2
NC_013941:5317424:532716753271675327379213Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein2e-1064.7
NC_011750:1565000:157446915744691574681213Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage3e-1063.9
NC_000913:1625500:163647916364791636691213Escherichia coli K12, complete genomeQin prophage; cold shock protein3e-1063.9
CP002185:1770815:177845017784501778662213Escherichia coli W, complete genomeQin prophage; cold shock protein3e-1063.9
CP002516:2305659:232719423271942327406213Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein3e-1063.9
CU928160:1668842:167647716764771676689213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-1063.9
NC_011740:4520373:452982845298284530040213Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage3e-1063.9
NC_011751:1859606:186837018683701868582213Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage3e-1063.9
AC_000091:1627049:164016916401691640381213Escherichia coli W3110 DNA, complete genomecold shock protein3e-1063.9
NC_010468:2265423:228413722841372284349213Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein3e-1063.9
NC_010473:1712984:172610417261041726316213Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein3e-1063.9
NC_009800:1657550:166751416675141667729216Escherichia coli HS, complete genomecold shock DNA-binding protein3e-1063.9
NC_004431:3040953:304868330486833048898216Escherichia coli CFT073, complete genomeCold shock-like protein cspI3e-1063.9
NC_016902:2305659:232719423271942327406213Escherichia coli KO11FL chromosome, complete genomecold-shock protein3e-1063.9
NC_013361:2138716:214752921475292147741213Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein3e-1063.9
NC_012967:1593101:161064816106481610860213Escherichia coli B str. REL606 chromosome, complete genomecold shock protein3e-1063.9
NC_012759:1517500:152853815285381528750213Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein3e-1063.9
NC_011742:4962008:497235949723594972571213Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage3e-1063.9
NC_011741:1668842:167647716764771676689213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-1063.9
NC_014306:4901390:492860049286004928812213Erwinia billingiae Eb661, complete genomeCold-shock DNA-binding domain protein4e-1063.5
NC_012912:242709:264877264877265089213Dickeya zeae Ech1591, complete genomecold-shock DNA-binding domain protein9e-1062.4
NC_013282:1842412:186615718661571866369213Cronobacter turicensis, complete genomeCold shock-like protein cspB2e-0961.6
NC_006905:3780000:378721937872193787431213Salmonella enterica subsp. enterica serovar Choleraesuis strCold shock protein cspA (CSP-A)3e-0960.8
NC_004337:3590323:369111436911143691326213Shigella flexneri 2a str. 301, complete genomecold shock protein 7.4, transcriptional activator of hns3e-0960.8
NC_008258:3581583:360014336001433600355213Shigella flexneri 5 str. 8401, complete genomeCold shock protein cspA3e-0960.8
NC_011601:3951324:397393139739313974143213Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomemajor cold shock protein3e-0960.8
NC_013941:5317424:532390153239015324116216Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein3e-0960.8
NC_005810:1976000:198003719800371980249213Yersinia pestis biovar Microtus str. 91001, complete genomecold shock protein3e-0960.5
CP002516:2305659:232430723243072324522216Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein3e-0960.5
CP002185:1770815:178133417813341781549216Escherichia coli W, complete genomeQin prophage; cold shock protein3e-0960.5
AC_000091:1627049:164305316430531643268216Escherichia coli W3110 DNA, complete genomecold shock protein3e-0960.5
NC_010473:1712984:172898817289881729203216Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein3e-0960.5
NC_000913:1625500:163936316393631639578216Escherichia coli K12, complete genomeQin prophage; cold shock protein3e-0960.5
NC_011751:1859606:187125518712551871470216Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage3e-0960.5
CU928160:1668842:167936216793621679577216Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-0960.5
NC_004088:1291754:131314113131411313395255Yersinia pestis KIM, complete genomecold shock protein E3e-0960.5
NC_010468:2265423:228125022812502281465216Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein3e-0960.5
NC_003143:1880000:188377318837731883985213Yersinia pestis CO92, complete genomecold shock protein3e-0960.5
NC_011742:4962008:496890749689074969122216Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage3e-0960.5
NC_004431:3040953:305213330521333052348216Escherichia coli CFT073, complete genomeCold shock-like protein cspB3e-0960.5
NC_011740:4520373:452637645263764526591216Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage3e-0960.5
NC_017265:1715035:172019317201931720405213Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,cold shock protein3e-0960.5
NC_016902:2305659:232430723243072324522216Escherichia coli KO11FL chromosome, complete genomecold-shock protein3e-0960.5
NC_012759:1517500:153142215314221531637216Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein3e-0960.5
NC_011741:1668842:167936216793621679577216Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage3e-0960.5
NC_009381:2009842:202597220259722026184213Yersinia pestis Pestoides F chromosome, complete genomecold shock protein3e-0960.5
NC_011750:1565000:157158215715821571797216Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage3e-0960.5
NC_008150:2785830:279363527936352793844210Yersinia pestis Antiqua, complete genomeputative cold shock protein4e-0960.1
NC_003143:2895617:291705429170542917263210Yersinia pestis CO92, complete genomecold shock protein E4e-0960.1
NC_012751:1190206:119321011932101193428219Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA chaperone, transcription antiterminator, affects expression of rpoS and uspA4e-0960.1
NC_013361:2138716:215041321504132150628216Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein5e-0959.7
NC_016832:948029:981128981128981340213Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cold shock-like protein cspJ9e-0958.9
NC_004631:948054:983453983453983665213Salmonella enterica subsp. enterica serovar Typhi Ty2, completecold shock protein9e-0958.9
NC_011205:1227373:123964812396481239860213Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cold-shock protein1e-0858.5
NC_011274:1129686:115301911530191153231213Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cold shock protein1e-0858.5
NC_016810:2027311:203679320367932037005213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein1e-0858.5
NC_016831:1865681:187193418719341872146213Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcold shock protein1e-0858.5
NC_016856:2085283:209063020906302090842213Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cold-shock protein1e-0858.5
NC_016857:2027311:203679320367932037005213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cold-shock protein1e-0858.5
NC_016863:2029340:203882220388222039034213Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cold-shock protein1e-0858.5
NC_017046:2026672:203615420361542036366213Salmonella enterica subsp. enterica serovar Typhimurium str. 798cold shock protein1e-0858.5
NC_009801:1756610:176239117623911762606216Escherichia coli E24377A, complete genomecold shock DNA-binding protein1e-0858.5
NC_015224:1440283:145498914549891455198210Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,cold shock protein CspE2e-0857.8
NC_008800:3279468:328277832827783282987210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock protein CspE2e-0857.8
NC_020064:1150982:116604211660421166251210Serratia marcescens FGI94, complete genomecold shock protein2e-0857.8
NC_011283:4966471:499118349911834991401219Klebsiella pneumoniae 342 chromosome, complete genomecold-shock DNA-binding protein3e-0857
NC_015663:4488058:449753344975334497751219Enterobacter aerogenes KCTC 2190 chromosome, complete genomecold-shock' DNA-binding domain-containing protein4e-0857
NC_009436:2685910:269332626933262693544219Enterobacter sp. 638, complete genomecold-shock DNA-binding protein family protein5e-0856.6
NC_020418:2084937:209106620910662091278213Morganella morganii subsp. morganii KT, complete genomecold shock protein E4e-0856.6
NC_011149:1110642:112583411258341126046213Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-0856.2
NC_004545:499709:507389507389507598210Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomecold shock protein E6e-0856.2
NC_008513:343540:349218349218349427210Buchnera aphidicola str. Cc (Cinara cedri), complete genomeCspE9e-0855.8
NC_016612:477407:486882486882487100219Klebsiella oxytoca KCTC 1686 chromosome, complete genome'cold-shock' DNA-binding domain protein1e-0755.1
NC_008149:2652825:266034426603442660553210Yersinia pestis Nepal516, complete genomecold shock protein3e-0753.5
NC_020064:2779864:278063427806342780843210Serratia marcescens FGI94, complete genomecold shock protein3e-0753.5
NC_003143:1973867:198948919894891989698210Yersinia pestis CO92, complete genomecold shock protein3e-0753.5
NC_015061:3147691:315346531534653153674210Rahnella sp. Y9602 chromosome, complete genomecold-shock DNA-binding domain protein3e-0753.5
NC_008800:1942000:195654119565411956750210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock-like protein CspC3e-0753.5
NC_016818:3148000:315400131540013154210210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecold shock protein3e-0753.5
NC_017047:3212000:321806732180673218276210Rahnella aquatilis HX2 chromosome, complete genomecold shock-like protein CspC3e-0753.5
NC_012880:2399205:240646524064652406674210Dickeya dadantii Ech703, complete genomecold-shock DNA-binding domain protein5e-0753.1
NC_021064:1705961:172466917246691724875207Propionibacterium avidum 44067, complete genomecold-shock DNA-binding protein family6e-0752.8
NC_008700:3514745:352715335271533527365213Shewanella amazonensis SB2B, complete genomeputative cold-shock DNA-binding domain protein1e-0652
NC_003112:844000:864530864530864733204Neisseria meningitidis MC58, complete genomecold-shock domain family protein2e-0651.6
NC_014752:1530000:153003315300331530236204Neisseria lactamica ST-640, complete genometranscriptional regulator2e-0651.6
NC_017505:841496:861553861553861756204Neisseria meningitidis alpha710 chromosome, complete genomecold-shock domain-containing protein2e-0651.6
NC_017512:760000:779059779059779262204Neisseria meningitidis WUE 2594, complete genomeputative cold shock protein2e-0651.6
NC_010120:788000:807735807735807977243Neisseria meningitidis 053442, complete genometranscriptional regulator1e-0651.6
NC_017514:1396000:139604313960431396285243Neisseria meningitidis M01-240149 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_017515:1429317:143094514309451431187243Neisseria meningitidis M04-240196 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_017517:867595:887531887531887773243Neisseria meningitidis M01-240355 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_003116:988000:100827010082701008473204Neisseria meningitidis Z2491, complete genometranscriptional regulator3e-0650.8