Pre_GI: BLASTP Hits

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Query: NC_017249:8165826:8173374 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8173374, End: 8174516, Length: 1143

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015591:1161007:1178980117898011800831104Sinorhizobium meliloti AK83 chromosome 3, complete sequencefamily 1 extracellular solute-binding protein3e-49196
NC_015591:1161007:1176700117670011778031104Sinorhizobium meliloti AK83 chromosome 3, complete sequencefamily 1 extracellular solute-binding protein4e-49195
NC_013524:171524:1792621792621803441083Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeextracellular solute-binding protein family 11e-41171
NC_002678:5060670:5076721507672150778361116Mesorhizobium loti MAFF303099, complete genomeABC transporter binding protein component5e-41168
NC_002678:4885790:4911919491191949130251107Mesorhizobium loti MAFF303099, complete genomeABC transporter, binding protein component4e-39162
NC_013524:969038:9810049810049822211218Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeextracellular solute-binding protein family 16e-38158
NC_003318:183914:2071812071812082631083Brucella melitensis 16M chromosome II, complete sequenceSPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN3e-37156
NC_016625:944925:9598379598379608711035Burkholderia sp. YI23 chromosome 2, complete sequenceSpermidine/putrescine-binding periplasmic protein3e-35149
NC_020453:1025891:1032515103251510335611047Agromonas oligotrophica S58 DNA, complete genomeputative AttC protein4e-33142
NC_008391:1210451:1220047122004712210841038Burkholderia cepacia AMMD chromosome 2, complete sequenceABC spermidine/putrescine transporter, periplasmic ligand binding protein8e-33141
NC_016835:128757:1491431491431501711029Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,spermidine/putrescine-binding periplasmic protein2e-31137
NC_006350:1909639:1911565191156519125961032Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative ABC transport system, substrate-binding protein1e-27124
NC_007434:2449721:2469768246976824707991032Burkholderia pseudomallei 1710b chromosome I, complete sequenceABC transporter, substrate binding protein (polyamine)1e-27124
NC_014217:2987450:3005259300525930063321074Starkeya novella DSM 506 chromosome, complete genomeextracellular solute-binding protein1e-27124
NC_008686:405159:4373844373844384481065Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative spermidine/putrescine-binding protein3e-27122
NC_018643:857911:8982068982068993331128Alpha proteobacterium HIMB5 chromosome, complete genomespermidine/putrescine ABC transporter, spermidine/putrescine-binding protein8e-23108
NC_014640:5897421:5908295590829559093411047Achromobacter xylosoxidans A8 chromosome, complete genomeTat pathway signal sequence domain-containing protein 251e-22107
NC_014532:2298628:2302731230273123038461116Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein3e-1996.3
NC_007948:4558000:4600085460008546011341050Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 18e-1788.2
NC_016027:1902854:190331819033181904289972Gluconacetobacter xylinus NBRC 3288, complete genomespermidine/putrescine ABC transporter substrate-binding periplasmic protein2e-1377
NC_011365:1969198:199652319965231997458936Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeputative extracellular solute-binding protein, PotD/PotF family2e-1377
NC_013209:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-01, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017100:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-03, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017108:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-12, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017111:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-32, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017121:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-07, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017125:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-22, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017146:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-26, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_017150:160892:2028422028422039541113Acetobacter pasteurianus IFO 3283-01-42C, complete genomespermidine/putrescine transporter substrate-binding periplasmic protein3e-0963.5
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein6e-0755.8
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein9e-0755.1
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein9e-0755.1
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein9e-0755.1
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein9e-0755.1
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF9e-0755.1
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein9e-0755.1
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein9e-0755.1
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein1e-0654.3
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor1e-0654.3
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein4e-0652.8
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein4e-0652.8
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD4e-0652.8
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein4e-0652.8
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein4e-0652.8
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor9e-0651.6