Pre_GI: BLASTP Hits

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Query: NC_017216:1494190:1509509 Bifidobacterium animalis subsp. lactis BLC1, complete genome

Start: 1509509, End: 1509802, Length: 294

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017217:1499832:151515115151511515444294Bifidobacterium animalis subsp. lactis V9 chromosome, completeCRISPR-associated Cas2 family protein1e-38158
NC_012815:1494263:150958215095821509875294Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeCRISPR-associated Cas2 family protein1e-38158
NC_012814:1494331:150965015096501509943294Bifidobacterium animalis subsp. lactis Bl-04, complete genomeCRISPR-associated Cas2 family protein1e-38158
NC_016906:3980122:398412839841283984415288Gordonia polyisoprenivorans VH2 chromosome, complete genomeCRISPR-associated protein, Cas22e-0754.7
NC_013715:1376985:137698513769851377284300Rothia mucilaginosa DY-18, complete genomeuncharacterized protein predicted to be involved in DNA repair3e-0753.9
NC_014215:421683:443868443868444170303Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein7e-0752.8