Pre_GI: BLASTP Hits

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Query: NC_016945:370471:428706 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 428706, End: 428873, Length: 168

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017269:303500:306386306386306811426Vibrio cholerae LMA3984-4 chromosome II, complete sequenceacetyltransferase (putative)2e-25114
NC_012667:931390:938099938099938275177Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein7e-25112
NC_012583:440420:457575457575457751177Vibrio cholerae O395 chromosome chromosome II, complete sequence7e-25112
NC_009456:787322:806191806191806367177Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein7e-25112
NC_002506:370629:428878428878429054177Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein, interruption7e-25112
NC_016446:119914:129428129428129595168Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein8e-25112
NC_012580:353273:364469364469364894426Vibrio cholerae M66-2 chromosome II, complete sequenceN-acetyltransferase GCN53e-24110
NC_012583:361241:379172379172379597426Vibrio cholerae O395 chromosome chromosome II, complete sequenceGCN5-related N-acetyltransferase3e-24110
NC_009456:787322:869602869602870027426Vibrio cholerae O395 chromosome 1, complete sequenceGNAT family acetyltransferase2e-24110
NC_012583:361241:393915393915394340426Vibrio cholerae O395 chromosome chromosome II, complete sequenceGCN5-related N-acetyltransferase2e-24110
NC_016446:49618:884128841288837426Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein6e-24109
NC_012667:931390:997950997950998444495Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein7e-24108
NC_009456:787322:884345884345884521177Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein9e-24108
NC_017269:303500:325968325968326087120Vibrio cholerae LMA3984-4 chromosome II, complete sequenceacetyltransferase (putative)4e-1373.6