Pre_GI: BLASTP Hits

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Query: NC_016945:370471:380199 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 380199, End: 380561, Length: 363

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:361241:388274388274388636363Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-44175
NC_009456:787322:875306875306875668363Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein8e-44175
NC_002506:370629:380380380380380742363Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein8e-44175
NC_007492:3655545:367055536705553670926372Pseudomonas fluorescens PfO-1, complete genomehypothetical protein8e-27119
NC_019904:5308998:531688953168895317254366Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein1e-1272
NC_013061:2077603:208824320882432088602360Pedobacter heparinus DSM 2366, complete genomehypothetical protein5e-0753.1