Pre_GI: BLASTP Hits

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Query: NC_016445:338288:366346 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 366346, End: 367011, Length: 666

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:859492:885867885867886532666Vibrio cholerae IEC224 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_012668:2744393:277429327742932774958666Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilus biosynthesis protein P transcriptional activator of ToxT promoter7e-129459
NC_012578:818241:846298846298846963666Vibrio cholerae M66-2 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_002505:860789:888846888846889511666Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_009457:351512:379581379581380246666Vibrio cholerae O395 chromosome 2, complete sequencetoxin co-regulated pilus biosynthesis protein P1e-126452
NC_012582:882931:911000911000911665666Vibrio cholerae O395 chromosome chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P1e-126452
NC_010159:3448490:345833334583333459049717Yersinia pestis Angola, complete genome7e-0857.4
NC_003143:875367:884191884191884907717Yersinia pestis CO92, complete genomeputative regulatory membrane protein7e-0857.4
NC_008149:3373229:338205333820533382769717Yersinia pestis Nepal516, complete genomeregulatory membrane protein7e-0857.4
NC_014029:1146900:116901011690101169726717Yersinia pestis Z176003 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017154:1089044:111115511111551111871717Yersinia pestis D106004 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017160:1092839:111382711138271114543717Yersinia pestis D182038 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017168:199381:220375220375221091717Yersinia pestis A1122 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017265:1000342:102245510224551023171717Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative regulatory membrane protein7e-0857.4
NC_004088:3505383:351420735142073514911705Yersinia pestis KIM, complete genomehypothetical protein7e-0857.4
NC_008150:513783:535893535893536642750Yersinia pestis Antiqua, complete genomeputative regulatory membrane protein7e-0857.4
NC_010465:1118147:114095811409581141710753Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, CadC7e-0857.4
NC_006155:3596120:360502136050213605680660Yersinia pseudotuberculosis IP 32953, complete genomeputative regulatory membrane protein.9e-0857
NC_010634:3509880:351878135187813519440660Yersinia pseudotuberculosis PB1/+, complete genometranscriptional regulator, CadC9e-0857
NC_009708:1131500:115250211525021153161660Yersinia pseudotuberculosis IP 31758 chromosome, complete genometranscriptional regulator9e-0857