Pre_GI: BLASTP Hits

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Query: NC_013941:5317424:5317424 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 5317424, End: 5318365, Length: 942

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:4520373:452072145207214521662942Escherichia fergusonii ATCC 35469, complete genomeputative phage replication protein O3e-157554
NC_011742:2863316:286516928651692866110942Escherichia coli S88 chromosome, complete genomephage replication protein O4e-157554
NC_007946:2931364:293283129328312933772942Escherichia coli UTI89, complete genomehypothetical protein4e-157554
NC_008563:2946391:294785829478582948799942Escherichia coli APEC O1, complete genomehypothetical protein4e-157554
NC_004431:3040953:305706030570603058001942Escherichia coli CFT073, complete genomeUnknown protein encoded by cryptic prophage6e-157553
NC_014562:983398:994899994899995846948Pantoea vagans C9-1 chromosome, complete genomeReplication protein 154e-96351
NC_017060:59500:100453100453101379927Rahnella aquatilis HX2 plasmid PRA1, complete sequencereplication protein4e-80298
AC_000091:2462461:247832424783242478692369Escherichia coli W3110 DNA, complete genomepredicted defective phage replication protein O9e-69260
NC_010473:2548946:256266525626652563033369Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; predicted defective phage replication protein O9e-69260
NC_000913:2455037:247090024709002471268369Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; predicted defective phage replication protein O9e-69260
CU928145:1773642:1792151179215117931701020Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-53210
NC_011748:1408280:1415230141523014162491020Escherichia coli 55989, complete genomehypothetical protein1e-53210
NC_011751:1859606:1878313187831318793321020Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-53210
NC_011748:1773642:1792151179215117931701020Escherichia coli 55989, complete genomehypothetical protein1e-53210
CU928145:1408280:1415230141523014162491020Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-53210
NC_009801:1756610:177057117705711771536966Escherichia coli E24377A, complete genomephage O protein family1e-53210
NC_020260:1615135:162464416246441625528885Cronobacter sakazakii Sp291, complete genomereplication protein1e-53209
NC_014121:1682638:168739616873961688367972Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage O protein2e-53209
NC_012947:2189533:218953321895332190498966Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage O protein family1e-52207
CU928160:1668842:1689021168902116900401020Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein9e-53207
NC_011741:1668842:1689021168902116900401020Escherichia coli IAI1 chromosome, complete genomehypothetical protein9e-53207
NC_013361:2138716:215808221580822159047966Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein7e-53207
NC_010468:2265423:227089522708952271809915Escherichia coli ATCC 8739, complete genomehypothetical protein2e-52206
CP002516:2305659:231392623139262314891966Escherichia coli KO11, complete genomephage O protein family1e-52206
CP002185:1770815:179096517909651791930966Escherichia coli W, complete genomehypothetical protein1e-52206
NC_016902:2305659:231392623139262314891966Escherichia coli KO11FL chromosome, complete genomephage O protein family1e-52206
NC_012779:2184927:219804121980412199039999Edwardsiella ictaluri 93-146, complete genomephage O protein family9e-52204
NC_015062:99969:1015661015661025881023Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein9e-41167
NC_017047:1906000:1909218190921819102281011Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-40165
NC_014838:218000:232383232383233264882Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, GntR family3e-40165
AC_000091:1191353:1205747120574712071141368Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-39162
NC_000913:1188999:1203393120339312047601368Escherichia coli K12, complete genomee14 prophage; predicted DNA-binding transcriptional regulator2e-39162
NC_013282:1804909:181698418169841817880897Cronobacter turicensis, complete genomehypothetical protein1e-32140
NC_020181:5217000:523662052366205237531912Enterobacter aerogenes EA1509E, complete genomeFIG01047124: hypothetical protein1e-27124
NC_012731:2083650:209994620999462100857912Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-27123
NC_009778:959982:979322979322979585264Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-25114
NC_016514:2476359:251218525121852513135951Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YfdO2e-23110
NC_016612:3314846:3325466332546633265421077Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage O protein family5e-23108
NC_009792:1770106:178512917851291786127999Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-23107
NC_009778:1556222:156616415661641567021858Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-22105
NC_014306:3524980:356534435653443566291948Erwinia billingiae Eb661, complete genomePhage replication protein O4e-1995.5
NC_011740:2769961:2784994278499427860131020Escherichia fergusonii ATCC 35469, complete genomeReplication protein O frm phage origin2e-1790.5
NC_011751:643976:6532266532266542451020Escherichia coli UMN026 chromosome, complete genomereplication protein O frm phage origin1e-1790.5
NC_013008:2910567:2928121292812129291401020Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O1e-1790.5
NC_013941:699286:7055757055757065941020Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O1e-1790.5
NC_011748:824367:8289848289848300031020Escherichia coli 55989, complete genomeReplication protein O frm phage origin1e-1790.5
CU928145:824367:8289848289848300031020Escherichia coli 55989 chromosome, complete genomeReplication protein O frm phage origin1e-1790.5
NC_011353:2957962:2973250297325029742541005Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage replication protein O2e-1790.1
NC_011415:600375:618276618276619205930Escherichia coli SE11 chromosome, complete genomeputative phage replication protein3e-1789.7
NC_012759:4132527:414428741442874145186900Escherichia coli BW2952 chromosome, complete genomeReplication protein O3e-1789.4
NC_011601:1039500:105322710532271054126900Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein3e-1789.4
NC_013361:3112023:312820231282023129140939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein3e-1789.4
NC_013008:3231414:323499632349963235934939Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O3e-1789.4
NC_011353:3276734:328012532801253281063939Escherichia coli O157:H7 str. EC4115 chromosome, complete genomereplication protein O3e-1789.4
NC_013941:975353:990688990688991587900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1789.4
NC_012947:3015985:302002130200213020920900Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage replication protein O3e-1789.4
NC_011751:1405381:142064614206461421545900Escherichia coli UMN026 chromosome, complete genomereplication protein from bacteriophage origin3e-1789.4
AP010958:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009 DNA, complete genomereplication protein3e-1789.4
NC_002655:1332961:134438413443841345322939Escherichia coli O157:H7 EDL933, complete genomeputative replication protein O of bacteriophage BP-933W3e-1789.4
NC_013353:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009, complete genomereplication protein3e-1789.4
NC_013361:1558423:157197515719751572913939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein3e-1789.4
NC_013364:1183000:119564111956411196579939Escherichia coli O111:H- str. 11128, complete genomeputative replication protein3e-1789.4
NC_013941:3300000:330100833010083301946939Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O3e-1789.4
NC_007946:1239278:125173912517391252638900Escherichia coli UTI89, complete genomeputative replication protein O of bacteriophage5e-1788.6
NC_008563:1175035:118912611891261190025900Escherichia coli APEC O1, complete genomeputative replication protein O of bacteriophage5e-1788.6
NC_004431:1401681:141389114138911414790900Escherichia coli CFT073, complete genomePutative replication protein O of bacteriophage5e-1788.6
NC_011353:305820:307704307704308201498Escherichia coli O157:H7 str. EC4115 chromosome, complete genome6e-1788.2
NC_011742:1177946:119305611930561193547492Escherichia coli S88 chromosome, complete genome7e-1788.2
NC_002655:301940:303947303947304321375Escherichia coli O157:H7 EDL933, complete genomepartial O replication protein for prophage CP-933H7e-1684.7
NC_015663:4522109:453565545356554536587933Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-1582.8
NC_015663:4767443:478349947834994784431933Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-1480.9
NC_016514:2387312:239990123999012400890990Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YfdO2e-1480.1
NC_009783:1956000:195917119591711960127957Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-1376.3
NC_011601:717072:732229732229733005777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein4e-0962.4
NC_008563:5011997:501336650133665014184819Escherichia coli APEC O1, complete genomeputative replication protein5e-0858.9
NC_011742:4962008:496333849633384964195858Escherichia coli S88 chromosome, complete genomereplication protein from phage origin4e-0858.9
NC_011750:5045927:506301450630145063832819Escherichia coli IAI39 chromosome, complete genomeputative replication protein from phage4e-0858.9
NC_014922:825396:846410846410847192783Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein2e-0756.6
NC_007146:1405459:142721814272181428000783Haemophilus influenzae 86-028NP, complete genomehypothetical protein2e-0756.6
NC_009567:904922:906800906800907582783Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein2e-0756.6
NC_017190:852171:861499861499862272774Bacillus amyloliquefaciens LL3 chromosome, complete genomereplication protein O3e-0756.2
NC_014551:865254:875602875602876375774Bacillus amyloliquefaciens DSM 7, complete genomeReplication protein O6e-0755.1
NC_014216:2538500:254237725423772543231855Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein2e-0653.5
NC_009665:3869904:389207738920773892913837Shewanella baltica OS185 chromosome, complete genomeputative replication protein3e-0653.1
NC_009997:2352948:235382123538212354657837Shewanella baltica OS195, complete genomehypothetical protein3e-0653.1
NC_016901:4039335:405925940592594060080822Shewanella baltica OS678 chromosome, complete genomehypothetical protein3e-0652.8
NC_009997:4091371:411129541112954112131837Shewanella baltica OS195, complete genomehypothetical protein3e-0652.8