Pre_GI: BLASTP Hits

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Query: NC_013716:3109700:3122439 Citrobacter rodentium ICC168, complete genome

Start: 3122439, End: 3123194, Length: 756

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:1869000:190129919012991902039741Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-114411
NC_014618:4657719:466608246660824666441360Enterobacter cloacae SCF1 chromosome, complete genome1e-54213
NC_012912:2174183:219950721995072200337831Dickeya zeae Ech1591, complete genomehypothetical protein5e-54211
NC_011283:4170369:4170369417036941798759507Klebsiella pneumoniae 342 chromosome, complete genomefilamentous hemagglutinin family protein1e-53209
NC_009708:588102:6107596107596126811923Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-53208
NC_010634:4045794:404903440490344049846813Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-52204
NC_006155:4105542:410878241087824109594813Yersinia pseudotuberculosis IP 32953, complete genome4e-52204
NC_010694:2189652:2209314220931422188689555Erwinia tasmaniensis, complete genome9e-49193
NC_009708:588102:59250259250260255410053Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeadhesin/hemagglutinin2e-46186
NC_013592:2160000:2166705216670521756358931Dickeya dadantii Ech586, complete genomefilamentous hemagglutinin family outer membrane protein3e-46185
NC_009832:4521585:45215854521585453239310809Serratia proteamaculans 568, complete genomefilamentous haemagglutinin family outer membrane protein1e-43176
NC_014618:4657719:4677155467715546791882034Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-43175
NC_012962:3864000:3877461387746138865509090Photorhabdus asymbiotica, complete genomePutative adhesin/hemagglutinin/hemolysin6e-36150
NC_005966:923008:9389969389969403961401Acinetobacter sp. ADP1, complete genomeputative hemagglutinin/hemolysin-related protein7e-34144
UCMB5137:276121:287163287163287861699Bacillus atrophaeus UCMB-5137YqcG1e-27123
NC_013716:3109700:31097003109700312121611517Citrobacter rodentium ICC168, complete genomeputative fimbrial adhesin3e-24112
NC_010634:4045794:40501944050194406033010137Yersinia pseudotuberculosis PB1/+, complete genomefilamentous haemagglutinin outer membrane protein4e-24111
NC_006155:4105542:41099424109942412007810137Yersinia pseudotuberculosis IP 32953, complete genomepossible adhesin/hemolysin4e-24111
NC_020244:1264500:126807112680711268244174Bacillus subtilis XF-1, complete genomehypothetical protein1e-1273.9
NC_007946:258747:2676072676072690461440Escherichia coli UTI89, complete genomehypothetical protein3e-1065.9
NC_011742:258746:2676062676062690451440Escherichia coli S88 chromosome, complete genomehypothetical protein3e-1065.9
NC_008253:257059:2669322669322683711440Escherichia coli 536, complete genomehypothetical protein3e-1065.9
NC_008563:258725:2675852675852690241440Escherichia coli APEC O1, complete genomehypothetical protein2e-0962.8
NC_016001:224213:239163239163239540378Flavobacterium branchiophilum, complete genome4e-0858.5
NC_007492:2310793:2323362232336223280924731Pseudomonas fluorescens PfO-1, complete genomeRhs family protein2e-0756.6
NC_013283:113660:129797129797129919123Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein9e-0753.9