Pre_GI: BLASTP Hits

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Query: NC_013716:3109700:3121467 Citrobacter rodentium ICC168, complete genome

Start: 3121467, End: 3121664, Length: 198

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:1869000:190067619006761900858183Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-1579.3
NC_015968:511282:528718528718529191474Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein3e-1477
NC_016514:506611:530199530199530657459Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein7e-1475.9
NC_014121:677799:696780696780697235456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1375.1
NC_011205:329155:337601337601337810210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-1269.3
NC_013592:2160000:217623521762352176441207Dickeya dadantii Ech586, complete genomeDomain of unknown function DUF1813 HSP20-like protein1e-1065.5
NC_013592:2160000:217890621789062179175270Dickeya dadantii Ech586, complete genomehypothetical protein9e-1165.5
NC_012912:2285778:230357823035782303790213Dickeya zeae Ech1591, complete genomeDomain of unknown function DUF1813 HSP20-like protein1e-1065.1
NC_012912:2174183:219338421933842193671288Dickeya zeae Ech1591, complete genomeDomain of unknown function DUF1813 HSP20-like protein2e-1064.7
NC_016863:332060:340428340428340676249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-1063.5
NC_016860:332087:340455340455340646192Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein5e-1063.2
NC_017046:329847:339930339930340121192Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-1063.2
NC_011080:333121:344281344281344457177Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-1063.2
NC_003198:331314:339851339851340156306Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-1062.4
NC_016832:2612809:263792926379292638162234Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-0962
NC_006511:2540500:256570325657032566017315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-0962
NC_012962:3933715:395555039555503955717168Photorhabdus asymbiotica, complete genomehypothetical protein2e-0857.8
NC_004547:3817656:382804538280453828374330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0857
NC_004547:3817656:382111538211153821444330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0857
NC_006905:326517:335030335030335344315Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein5e-0856.6
NC_011205:329155:344014344014344256243Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-0856.2
NC_012125:326909:334900334900335142243Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein7e-0856.2
NC_014228:2883500:288362528836252883954330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-0752.4