Pre_GI: BLASTP Hits

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Query: NC_013410:3685588:3704385 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3704385, End: 3704822, Length: 438

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:530397:557628557628558053426Pseudomonas fluorescens F113 chromosome, complete genome4-hydroxybenzoyl- thioesterase domain-containing protein2e-33140
NC_004431:1119700:115078611507861151208423Escherichia coli CFT073, complete genomehypothetical protein7e-27119
NC_012225:316000:324248324248324673426Brachyspira hyodysenteriae WA1, complete genomeesterase2e-24110
NC_012780:284336:297776297776298195420Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein5e-1063.2
NC_007759:1666967:166765916676591668075417Syntrophus aciditrophicus SB, complete genomethioesterase3e-0857.4
NC_005945:3359598:337422333742233374642420Bacillus anthracis str. Sterne, complete genome4-hydroxybenzoyl-CoA thioesterase, putative4e-0857
NC_015760:2009425:201475220147522015165414Streptococcus salivarius CCHSS3, complete genomeesterase2e-0754.3
NC_008312:6932847:694844469484446948929486Trichodesmium erythraeum IMS101, complete genome4-hydroxybenzoyl-CoA thioesterase6e-0753.1
NC_020304:547036:551274551274551711438Desulfocapsa sulfexigens DSM 10523, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family1e-0652
NC_015587:765500:780141780141780536396Hydrogenobaculum sp. SHO chromosome, complete genome4-hydroxybenzoyl-CoA thioesterase2e-0650.8
NC_011126:779500:794110794110794505396Hydrogenobaculum sp. Y04AAS1, complete genomethioesterase superfamily protein2e-0650.8
NC_015557:765500:780086780086780481396Hydrogenobaculum sp. 3684 chromosome, complete genome4-hydroxybenzoyl-CoA thioesterase2e-0650.8
NC_020411:765500:780113780113780508396Hydrogenobaculum sp. HO, complete genomethioesterase superfamily protein2e-0650.8
NC_011830:2940500:294837029483702948819450Desulfitobacterium hafniense DCB-2, complete genomethioesterase superfamily protein4e-0650.4