Pre_GI: BLASTP Hits

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Query: NC_013199:2426686:2429537 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2429537, End: 2430070, Length: 534

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:2458080:2460083246008324614621380Lactobacillus rhamnosus GG, complete genomelactococcin A ABC transporter, permease protein3e-57221
NC_014334:2307950:2310519231051923118981380Lactobacillus casei str. Zhang chromosome, complete genomelactococcin A ABC transporter permease protein2e-40164
NC_008526:2373190:2375759237575923771381380Lactobacillus casei ATCC 334, complete genomelactococcin A ABC transporter permease protein2e-40164
NC_010999:2516000:2518578251857825199571380Lactobacillus casei, complete genomeSppE2e-40164
NC_014554:337268:3710543710543724301377Lactobacillus plantarum subsp. plantarum ST-III chromosome,bacteriocin ABC transporter, accessory factor PlnH8e-1579.7
NC_004567:343500:3786023786023799781377Lactobacillus plantarum WCFS1, complete genomebacteriocin ABC transporter, accessory factor PlnH8e-1579.7
NC_011134:533679:5453435453435467101368Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransport protein ComB4e-1167.4
NC_012470:1635516:1646301164630116476681368Streptococcus equi subsp. zooepidemicus, complete genometransport protein ComB9e-1166.2