Pre_GI: BLASTP Hits

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Query: NC_013199:2426686:2428692 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2428692, End: 2429507, Length: 816

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:2458080:2460083246008324614621380Lactobacillus rhamnosus GG, complete genomelactococcin A ABC transporter, permease protein9e-148522
NC_010999:2516000:2518578251857825199571380Lactobacillus casei, complete genomeSppE1e-92339
NC_008526:2373190:2375759237575923771381380Lactobacillus casei ATCC 334, complete genomelactococcin A ABC transporter permease protein2e-92338
NC_014334:2307950:2310519231051923118981380Lactobacillus casei str. Zhang chromosome, complete genomelactococcin A ABC transporter permease protein7e-92337
NC_014554:337268:3710543710543724301377Lactobacillus plantarum subsp. plantarum ST-III chromosome,bacteriocin ABC transporter, accessory factor PlnH1e-31137
NC_004567:343500:3786023786023799781377Lactobacillus plantarum WCFS1, complete genomebacteriocin ABC transporter, accessory factor PlnH1e-31137
NC_011134:533679:5453435453435467101368Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransport protein ComB8e-22104
NC_012470:1635516:1646301164630116476681368Streptococcus equi subsp. zooepidemicus, complete genometransport protein ComB8e-22104
NC_020207:2240115:2245348224534822466461299Enterococcus faecium NRRL B-2354, complete genomeBacteriocin export accessory protein1e-1273.9
NC_006576:456569:4674314674314691341704Synechococcus elongatus PCC 6301, complete genomehypothetical protein2e-0756.2
NC_007604:1145373:1151670115167011533731704Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-0756.2
NC_008600:4898000:4898032489803248990901059Bacillus thuringiensis str. Al Hakam, complete genomepossible periplasmic component of efflux system1e-0653.5