Pre_GI: BLASTP Hits

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Query: NC_013198:36829:49244 Lactobacillus rhamnosus GG, complete genome

Start: 49244, End: 49573, Length: 330

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014334:37040:480804808048409330Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein1e-46184
NC_015978:113656:117837117837118163327Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein4e-1683.6
NC_006448:1568000:157913815791381579464327Streptococcus thermophilus LMG 18311, complete genomeConserved hypothetical, predicted membrane protein (TMS3)3e-0960.5
NC_006449:1572000:158269915826991583025327Streptococcus thermophilus CNRZ1066, complete genomehypothetical protein3e-0960.5
NC_007793:15441:154411544115770330Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein5e-0856.6
NC_002953:15416:154161541615745330Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein5e-0856.6
NC_007795:15414:154141541415743330Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein5e-0856.6
NC_002952:15405:154051540515734330Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein5e-0856.6
NC_003923:15416:154161541615745330Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein5e-0856.6
NC_002951:15441:154411544115770330Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein5e-0856.6
NC_010079:15441:154411544115770330Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible membrane protein5e-0856.6
NC_009641:15421:154211542115750330Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein5e-0856.6
NC_016912:15414:154141541415743330Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein5e-0856.6
NC_017351:15413:154131541315742330Staphylococcus aureus subsp. aureus 11819-97 chromosome, completebranched-chain amino acid transport family protein5e-0856.6
NC_017338:14886:148861488615215330Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeBranched-chain amino acid transport protein, AzlD4e-0856.6
NC_004461:1:155181551815847330Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein9e-0855.8
NC_002976:2580485:260084326008432601172330Staphylococcus epidermidis RP62A, complete genomehypothetical protein9e-0855.8
NC_016941:14658:153501535015679330Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein2e-0754.7
NC_009725:2784334:280356628035662803889324Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein8e-0649.3