Pre_GI: BLASTP Hits

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Query: NC_013198:36829:46849 Lactobacillus rhamnosus GG, complete genome

Start: 46849, End: 48519, Length: 1671

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014727:95875:1054041054041072841881Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,peptidoglycan binding domain protein3e-109396
NC_016047:345491:3472683472683494482181Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-64248
NC_014639:3850000:3867122386712238692992178Bacillus atrophaeus 1942 chromosome, complete genomeYbfG protein5e-63242
CP002207:3850000:3867122386712238692992178Bacillus atrophaeus 1942, complete genomeYbfG5e-63242
NC_020272:3325000:3333612333361233358972286Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein4e-52206
NC_008054:1815723:184036218403621841330969Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein3e-52206
NC_017190:591139:6045276045276068122286Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein1e-51204
NC_014551:605855:6190086190086212932286Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-51204
NC_000964:1474451:1478441147844114807232283Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-47189
NC_019896:2579036:2588470258847025907522283Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein5e-47189
NC_014215:349917:3563413563413584912151Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,peptidoglycan binding domain protein1e-46188
NC_016114:1435436:1442790144279014450122223Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein4e-44179
NC_009380:725870:7336717336717358662196Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein1e-42174
NC_021064:816000:8243628243628267612400Propionibacterium avidum 44067, complete genomehypothetical protein1e-42174
NC_015067:32500:4513445134475302397Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein6e-40166
NC_008618:10915:2435724357267532397Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein6e-40166
NC_015434:1671532:1678676167867616810602385Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein8e-40165
NC_015957:2781740:2791615279161527939842370Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein3e-37156
NC_016582:11672500:116822561168225611683050795Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1687.8
NC_013198:36829:450704507046026957Lactobacillus rhamnosus GG, complete genomehypothetical protein2e-0861.2