Pre_GI: BLASTP Hits

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Query: NC_013198:1030970:1045307 Lactobacillus rhamnosus GG, complete genome

Start: 1045307, End: 1046506, Length: 1200

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013504:1648551:1670478167047816716771200Lactobacillus johnsonii FI9785 chromosome, complete genomemajor facilitator superfamily permease1e-97357
NC_013199:1150000:1162899116289911640921194Lactobacillus rhamnosus Lc 705, complete genomepermease of the major facilitator superfamily3e-62239
NC_016941:1774000:1788636178863617898171182Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein4e-57222
NC_002952:1917999:1934127193412719353081182Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein8e-57221
NC_016928:1843597:1860188186018818613691182Staphylococcus aureus subsp. aureus M013 chromosome, completeMultidrug resistance protein9e-57221
NC_010184:4532262:4557694455769445588871194Bacillus weihenstephanensis KBAB4, complete genomemajor facilitator superfamily MFS_11e-56220
NC_002953:1819411:1836027183602718372081182Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein1e-56220
NC_003923:1841500:1856691185669118578721182Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-56220
NC_002745:1804000:1818884181888418200651182Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein4e-56219
NC_002758:1880323:1896678189667818978591182Staphylococcus aureus subsp. aureus Mu50, complete genomemultidrug resistance protein homolog4e-56219
NC_009782:1881722:1898077189807718992581182Staphylococcus aureus subsp. aureus Mu3, complete genomemultidrug resistance protein homolog4e-56219
NC_009487:1925645:1942006194200619431871182Staphylococcus aureus subsp. aureus JH9 chromosome, completemajor facilitator transporter4e-56219
NC_009632:1927372:1941880194188019430611182Staphylococcus aureus subsp. aureus JH1 chromosome, completemajor facilitator transporter4e-56219
NC_013450:1825010:1841485184148518426661182Staphylococcus aureus subsp. aureus ED98, complete genomedrug transporter, putative4e-56219
NC_010079:1871915:1888582188858218897631182Staphylococcus aureus subsp. aureus USA300_TCH1516, completeMFS family major facilitator transporter4e-56219
NC_007795:1774725:1791523179152317927041182Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein4e-56219
NC_002951:1848684:1865521186552118667021182Staphylococcus aureus subsp. aureus COL, complete genomedrug transporter, putative4e-56219
NC_007793:1871165:1887832188783218890131182Staphylococcus aureus subsp. aureus USA300, complete genomeputative drug transporter4e-56219
NC_009641:1833000:1848362184836218495431182Staphylococcus aureus subsp. aureus str. Newman chromosome,multidrug resistance transporter protein B4e-56219
NC_016912:1732354:1749152174915217503331182Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein4e-56219
NC_017338:1830790:1845298184529818464791182Staphylococcus aureus subsp. aureus JKD6159 chromosome, completemultidrug resistance transporter protein B4e-56219
NC_017341:1851972:1868602186860218697831182Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,multidrug resistance transporter protein B4e-56219
NC_008600:4509793:4534364453436445355571194Bacillus thuringiensis str. Al Hakam, complete genomepermease, possible multidrug resistance protein7e-56218
NC_012472:4515909:4540517454051745417101194Bacillus cereus 03BB102, complete genomeputative permease7e-56218
NC_016779:4475425:4499970449997045011631194Bacillus cereus F837/76 chromosome, complete genomepermease7e-56218
NC_017337:1829840:1846244184624418474251182Staphylococcus aureus subsp. aureus ED133 chromosome, completemultidrug resistance protein B7e-56218
NC_017342:1462297:1463360146336014645411182Staphylococcus aureus subsp. aureus TCH60 chromosome, completeMFS family major facilitator transporter4e-56218
NC_011658:4492356:4517553451755345187461194Bacillus cereus AH187 chromosome, complete genomeputative permease3e-55216
NC_016771:4445815:4471336447133644725291194Bacillus cereus NC7401, complete genomepermease3e-55216
NC_017208:4692478:4716843471684347180361194Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemultidrug resistance protein B3e-55216
NC_007622:1751500:1765690176569017668711182Staphylococcus aureus RF122, complete genomemultidrug resistance protein B2e-55216
NC_014171:4560061:4587460458746045886531194Bacillus thuringiensis BMB171 chromosome, complete genomemultidrug resistance protein B2e-55216
NC_012581:4509491:4533592453359245347851194Bacillus anthracis str. CDC 684 chromosome, complete genomeputative permease4e-55215
NC_004461:1465397:1484180148418014853941215Staphylococcus epidermidis ATCC 12228, complete genomemultidrug resistance protein-like protein1e-54214
NC_017343:1748620:1765095176509517662371143Staphylococcus aureus subsp. aureus ECT-R 2, complete genomemajor facilitator superfamily protein1e-54214
NC_017351:1869287:1885409188540918865511143Staphylococcus aureus subsp. aureus 11819-97 chromosome, completemajor facilitator superfamily protein1e-54214
NC_005957:4502733:4528218452821845294111194Bacillus thuringiensis serovar konkukian str. 97-27, completepermease; possible multidrug resistance protein7e-55214
NC_011773:4569600:4597024459702445982171194Bacillus cereus AH820 chromosome, complete genomeputative permease7e-55214
NC_002976:1361364:1380147138014713813611215Staphylococcus epidermidis RP62A, complete genomedrug transporter, putative3e-54212
NC_020164:1037979:1039599103959910407891191Staphylococcus warneri SG1, complete genomedrug transporter9e-53207
NC_007168:1167454:1168524116852411697111188Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-52207
NC_019903:421000:4210084210084222311224Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,arabinose efflux permease family protein1e-29130
NC_017347:1852500:186775618677561868184429Staphylococcus aureus subsp. aureus T0131 chromosome, completeMultidrug resistance transporter protein B4e-1169.3
NC_015425:198315:2033962033962046431248Clostridium botulinum BKT015925 chromosome, complete genomemajor facilitator superfamily protein2e-1067
NC_008593:196257:1986771986771999181242Clostridium novyi NT, complete genomemajor facilitator superfamily protein3e-1066.6
NC_013665:2495234:2516771251677125179941224Methanocella paludicola SANAE, complete genomeMFS transporter3e-1066.2
NC_006322:203932:2061522061522073781227Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0964.3
NC_006270:204000:2063452063452075711227Bacillus licheniformis ATCC 14580, complete genomeSugar transporter superfamily1e-0964.3
NC_003888:4613000:4616569461656946178581290Streptomyces coelicolor A3(2), complete genomeintegral membrane transport protein5e-0962.4
NC_014479:188009:2050542050542062771224Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeprobably exporter of rhizocticins from the cell1e-0861.6
NC_013890:808791:8087918087918100621272Dehalococcoides sp. GT chromosome, complete genomemajor facilitator superfamily MFS_15e-0859.3
NC_014655:614874:6242066242066253991194Leadbetterella byssophila DSM 17132 chromosome, complete genomemajor facilitator superfamily mfs_16e-0858.9
NC_013131:2517861:2523091252309125244281338Catenulispora acidiphila DSM 44928, complete genomemajor facilitator superfamily MFS_12e-0654.3
NC_015566:3417951:3439723343972334408411119Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein9e-0651.6