Pre_GI: BLASTP Hits

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Query: NC_011035:829945:861328 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 861328, End: 861639, Length: 312

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017277:96325:110392110392110724333Synechocystis sp. PCC 6803, complete genomeHtaR suppressor protein6e-1579.3
NC_017052:96325:110392110392110724333Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeHtaR suppressor protein6e-1579.3
NC_017039:96325:110392110392110724333Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeHtaR suppressor protein6e-1579.3
NC_000911:96325:110392110392110724333Synechocystis sp. PCC 6803, complete genomeHtaR suppressor protein6e-1579.3
NC_009434:3611738:374485937448593745188330Pseudomonas stutzeri A1501, complete genomeputative regulator PrlF3e-1373.6
NC_008786:1553833:157259915725991572925327Verminephrobacter eiseniae EF01-2, complete genomeHtaR suppressor protein7e-1372.8
NC_015856:1:193861938619727342Collimonas fungivorans Ter331 chromosome, complete genometranscriptional regulator1e-1168.9
NC_012988:2507142:252228725222872522628342Methylobacterium extorquens DM4, complete genometranscriptional regulator2e-1168.2