Pre_GI: BLASTP Hits

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Query: NC_010501:3013103:3017050 Pseudomonas putida W619, complete genome

Start: 3017050, End: 3017664, Length: 615

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:3404000:340792634079263408540615Pseudomonas putida KT2440, complete genometransporter, LysE family2e-71268
NC_017986:5509569:551273155127315513345615Pseudomonas putida ND6 chromosome, complete genomelysine exporter protein LysE/YggA3e-71267
NC_004129:3452885:348559534855953486233639Pseudomonas fluorescens Pf-5, complete genometransporter, LysE family1e-62238
NC_009436:2056000:206772820677282068375648Enterobacter sp. 638, complete genomelysine exporter protein LysE/YggA7e-54209
NC_010170:1417615:143407414340741434691618Bordetella petrii, complete genomeputative amino acid efflux transmembrane protein7e-1373.9
NC_018678:2382708:238495023849502385576627Alteromonas macleodii str. 'English Channel 673' chromosome,lysine exporter protein LysE/YggA9e-1373.6
NC_006138:2630338:263066726306672631317651Desulfotalea psychrophila LSv54, complete genomehypothetical protein9e-1373.6
NC_016613:1805907:182610618261061826753648Vibrio sp. EJY3 chromosome 1, complete sequenceHomoserine/homoserine lactone efflux protein3e-1271.6
NC_016514:1142607:115079911507991151443645Enterobacter cloacae EcWSU1 chromosome, complete genomeLeucine efflux protein1e-1169.7
NC_018750:3249756:326965532696553270272618Streptomyces venezuelae ATCC 10712, complete genomeL-lysine permease2e-1168.9
NC_013850:2182337:224120422412042241848645Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-1168.6
NC_020181:1653261:167123416712341671878645Enterobacter aerogenes EA1509E, complete genomePutative transport protein7e-1167
NC_012578:1465302:147568814756881476326639Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein5e-1064.3
NC_009457:1068000:107666710766671077305639Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein5e-1064.3
NC_009092:1684467:168446716844671685117651Shewanella loihica PV-4, complete genomeLysine exporter protein (LYSE/YGGA)6e-1064.3
NC_016944:1504888:151527415152741515912639Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-1063.9
NC_016445:984856:995241995241995879639Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-1063.9
NC_012668:2115228:212518721251872125825639Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1063.9
NC_002505:1507860:151824615182461518884639Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-1063.9
NC_020260:2725201:273941027394102740054645Cronobacter sakazakii Sp291, complete genomeleucine export protein LeuE1e-0963.5
NC_016629:3789554:382537338253733826008636Desulfovibrio africanus str. Walvis Bay chromosome, completelysine exporter protein LysE/YggA9e-0960.1
NC_008577:613958:625299625299625910612Shewanella sp. ANA-3 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)1e-0859.7
NC_016602:2037162:204777620477762048414639Vibrio furnissii NCTC 11218 chromosome 1, complete sequencethreonine efflux protein1e-0859.7
NC_002505:168532:197130197130197798669Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-0859.7
NC_016445:2593800:262239826223982623066669Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0859.7
NC_016944:168530:197140197140197808669Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-0859.7
NC_007498:1072112:108687910868791087496618Pelobacter carbinolicus DSM 2380, complete genomeputative threonine efflux protein1e-0859.7
NC_013456:1819421:182398218239821824617636Vibrio sp. Ex25 chromosome 1, complete genomethreonine efflux protein3e-0858.5
NC_015588:2200517:221407022140702214711642Isoptericola variabilis 225 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0756.6
NC_011740:2737467:273961227396122740244633Escherichia fergusonii ATCC 35469, complete genomeneutral amino-acid efflux system1e-0756.6
NC_020210:2969862:297178829717882972420633Geobacillus sp. GHH01, complete genomeputative transporter2e-0755.8
NC_014217:2172464:218715121871512187774624Starkeya novella DSM 506 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)5e-0754.3
NC_004603:1464000:146416614641661464825660Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative homoserine/homoserine lactone efflux protein5e-0754.3
NC_009328:2905000:290504229050422905710669Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehomoserine/homoserine lactone efflux protein1e-0653.1
NC_016002:3813039:381394238139423814574633Pseudogulbenkiania sp. NH8B, complete genomelysine exporter protein LysE/YggA1e-0653.1
NC_015410:2505168:251246825124682513082615Pseudomonas mendocina NK-01 chromosome, complete genomelysine exporter protein LysE/YggA3e-0652
NC_015434:2527412:255327525532752553871597Verrucosispora maris AB-18-032 chromosome, complete genomelysine exporter protein LysE/YggA4e-0651.6
NC_013947:4695000:469699346969934697640648Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)5e-0650.8
NC_010125:2483122:251558025155802516203624Gluconacetobacter diazotrophicus PAl 5, complete genomeLysine exporter protein6e-0650.8
NC_019940:389979:401378401378401986609Thioflavicoccus mobilis 8321 chromosome, complete genomethreonine efflux protein7e-0650.4
NC_013850:3303500:332030333203033320941639Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0550.1