Pre_GI: BLASTP Hits

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Query: NC_010498:4856011:4871451 Escherichia coli SMS-3-5, complete genome

Start: 4871451, End: 4871684, Length: 234

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:1862000:1898820189882019003551536Dickeya dadantii 3937 chromosome, complete genometransposase, IS3 family3e-1167.4
NC_009790:42112:6383063830649801151Escherichia coli E24377A plasmid pETEC_74, complete sequence3e-1167.4
NC_014839:12519:1559215592171241533Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceIntegrase catalytic region2e-0650.8