Pre_GI: BLASTP Hits

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Query: NC_010067:892729:923836 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 923836, End: 924072, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:2139188:214968121496812149923243Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeH-NS-like DNA-binding protein3e-23107
NC_008253:1938975:196741419674141967656243Escherichia coli 536, complete genomehypothetical protein3e-23107
NC_004431:2185750:221425622142562214498243Escherichia coli CFT073, complete genomehypothetical protein3e-23107
NC_004547:1873390:189150518915051891747243Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeHns-like DNA-binding protein8e-23105
NC_013716:2139952:216163021616302161872243Citrobacter rodentium ICC168, complete genomeH-NS-like DNA-binding protein3e-22103
NC_013421:1696746:170395217039521704194243Pectobacterium wasabiae WPP163, complete genome1e-21101