Pre_GI: BLASTP Hits

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Query: NC_009439:860571:874162 Pseudomonas mendocina ymp, complete genome

Start: 874162, End: 874557, Length: 396

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:4074367:409119640911964091624429Pseudomonas fulva 12-X chromosome, complete genomeFimbrial protein pilin3e-0857.4
NC_011901:837085:860386860386860832447Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completepilin4e-0857
NC_003902:3666544:367389136738913674331441Xanthomonas campestris pv. campestris str. ATCC 33913, completepilin8e-0855.8
NC_007086:1224867:127404712740471274487441Xanthomonas campestris pv. campestris str. 8004, complete genomepilin8e-0855.8
NC_009656:5297000:530881553088155309354540Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilin structural subunit1e-0755.5
NC_003902:3666544:367337736733773673811435Xanthomonas campestris pv. campestris str. ATCC 33913, completepilin3e-0753.9
NC_007086:1224867:127456712745671275001435Xanthomonas campestris pv. campestris str. 8004, complete genomepilin3e-0753.9
NC_020541:1014176:103205810320581032501444Rhodanobacter sp. 2APBS1, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-0652
NC_020829:1068438:107537410753741075835462Pseudomonas denitrificans ATCC 13867, complete genomeTfp pilus assembly protein major pilin PilA4e-0650.4
NC_020541:1014176:103127510312751031715441Rhodanobacter sp. 2APBS1, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein9e-0648.9