Pre_GI: BLASTP Hits

Some Help

Query: NC_009438:1282022:1288377 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 1288377, End: 1289177, Length: 801

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:3435495:344364634436463444446801Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF817e-106383
NC_011566:3994239:400537440053744006174801Shewanella piezotolerans WP3, complete genomehypothetical protein5e-61234
NC_015633:2565753:259898325989832599774792Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein7e-26117
NC_014931:3642779:364337136433713644216846Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF812e-24112
NC_008309:1827809:184600618460061846800795Haemophilus somnus 129PT, complete genomepossible permease2e-24112
NC_007404:2743877:274850127485012749307807Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein4e-23108
NC_011206:863987:872866872866873672807Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF814e-22105
NC_011761:684969:693860693860694654795Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein3e-22105
NC_015563:1951368:198349619834961984431936Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-21103
NC_015222:1607757:162247916224791623276798Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein4e-21101
NC_009348:2034500:204015020401502040944795Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein9e-21100
NC_008027:5533311:555357955535795554361783Pseudomonas entomophila L48, complete genomehypothetical protein1e-20100
NC_015942:3090275:310720431072043107998795Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-1996.7
NC_007519:1244198:125978312597831260583801Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein2e-1996.3
NC_009512:5632591:567705156770515677833783Pseudomonas putida F1, complete genomeprotein of unknown function DUF813e-1995.5
NC_017192:1028866:105098210509821051788807Arcobacter sp. L, complete genomehypothetical protein4e-1685.1
NC_015731:1578106:160345416034541604257804Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein1e-1376.6
NC_014006:3124818:312538631253863126216831Sphingobium japonicum UT26S chromosome 1, complete genomeputative permease4e-1272
NC_021150:201237:212345212345213148804Azotobacter vinelandii CA6, complete genomehypothetical protein3e-1065.9
NC_012560:201237:212345212345213148804Azotobacter vinelandii DJ, complete genomehypothetical protein3e-1065.9
NC_012997:2107933:211068721106872111505819Teredinibacter turnerae T7901, complete genomemembrane protein1e-0963.9
NC_009719:1135523:115573611557361156569834Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein3e-0962.8
NC_010725:4511939:453027545302754531087813Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF815e-0858.2
NC_007681:402773:417264417264418070807Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein4e-0652