Pre_GI: BLASTP Hits

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Query: NC_008278:3601959:3605483 Frankia alni ACN14a, complete genome

Start: 3605483, End: 3606088, Length: 606

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011891:3369170:338864133886413389216576Anaeromyxobacter dehalogenans 2CP-1, complete genomeregulatory protein TetR3e-22105
NC_012881:964823:984775984775985365591Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, TetR family2e-2098.6
NC_014622:653599:671913671913672491579Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator5e-1787.8
UCMB5137:1:351163511635694579Bacillus atrophaeus UCMB-5137putative transcriptional regulator (TetR/AcrR family)3e-1685.1
NC_020410:495184:541048541048541626579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (TetR/AcrR family)8e-1683.6
NC_014844:1270618:131264813126481313235588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeregulatory protein TetR7e-1580.5
NC_014391:2579919:260588226058822606496615Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR8e-1477
NC_013093:2633000:264604726460472646577531Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family4e-1271.2
NC_017904:5543490:555718255571825557778597Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-1270.9
NC_019697:4108944:412618041261804126779600Chamaesiphon minutus PCC 6605, complete genometranscriptional regulator5e-1167.8
NC_008705:27434:566425664257217576Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family1e-1066.2
NC_008146:20047:493024930249877576Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family1e-1066.2
NC_009953:3426344:344533134453313445921591Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_014666:4043279:406098240609824061575594Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-0962
NC_021177:163000:181013181013181522510Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, TetR family4e-0961.2
NC_010725:4035397:406738140673814068019639Methylobacterium populi BJ001, complete genometranscriptional regulator, TetR family1e-0859.7
NC_014391:2875553:287555328755532876134582Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR2e-0858.9
NC_007777:3231649:325052232505223251217696Frankia sp. CcI3, complete genometranscriptional regulator, TetR family4e-0858.2
NC_009338:3410349:342183734218373422478642Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator1e-0756.2
NC_014814:2588628:263759526375952638245651Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator1e-0756.2
NC_016818:1795576:183643218364321837088657Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator4e-0754.7
NC_016582:10326938:103509081035090810351474567Streptomyces bingchenggensis BCW-1 chromosome, complete genometranscriptional regulator5e-0754.3
NC_016887:4403872:442471044247104425288579Nocardia cyriacigeorgica GUH-2, complete genomeTetR family transcriptional regulator8e-0753.5
NC_018524:5066720:507384450738445074395552Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, tetR family protein8e-0753.5
NC_019673:3041936:305732330573233058018696Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0652.8
NC_008700:2788363:280763428076342808254621Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family3e-0652
NC_013169:513327:535446535446536012567Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, tetR family3e-0652
NC_015497:4564339:458567145856714586306636Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeregulatory protein TetR4e-0651.6
NC_008278:2863355:287201528720152872626612Frankia alni ACN14a, complete genomehypothetical protein4e-0651.2
NC_017955:3731480:382923138292313829785555Modestobacter marinus, complete genomeTetR family transcriptional regulator5e-0650.8
NC_010572:33724:520805208052712633Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative TetR-family transcriptional regulator7e-0650.4