Pre_GI: BLASTP Hits

Some Help

Query: NC_008260:2142311:2155011 Alcanivorax borkumensis SK2, complete genome

Start: 2155011, End: 2155673, Length: 663

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009925:2240871:225630122563012256981681Acaryochloris marina MBIC11017, complete genomehypothetical protein2e-71268
NC_014502:113839:133104133104133757654Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceanti-ECF sigma factor ChrR1e-64246
NC_015581:1731120:173645617364561737106651Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeanti-ECFsigma factor ChrR1e-57222
NC_004605:1385444:138687013868701387448579Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein1e-49196
NC_010338:4148667:415903141590314159705675Caulobacter sp. K31, complete genomeanti-ECFsigma factor, ChrR7e-45180
NC_010557:679656:737212737212737880669Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceanti-ECFsigma factor, ChrR1e-43176
NC_008392:1029134:107617310761731076907735Burkholderia cepacia AMMD chromosome 3, complete sequenceanti-ECFsigma factor, ChrR2e-43175
NC_008740:443274:482796482796483464669Marinobacter aquaeolei VT8, complete genomeanti-ECFsigma factor, ChrR6e-42170
NC_016147:1672482:167872216787221679390669Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeanti-ECFsigma factor ChrR3e-41168
NC_008750:2332000:234430223443022344970669Shewanella sp. W3-18-1, complete genomeanti-ECFsigma factor, ChrR8e-41166
NC_009659:1024201:103920510392051039900696Janthinobacterium sp. Marseille chromosome, complete genometranscription negative regulator ChrR5e-40164
NC_011662:2320100:235633423563342357002669Thauera sp. MZ1T, complete genomeanti-ECFsigma factor, ChrR4e-36151
NC_007404:2048000:205983720598372060289453Thiobacillus denitrificans ATCC 25259, complete genomeAnti-Sigm factor, ChrR4e-1581.6