Pre_GI: BLASTP Hits

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Query: NC_008228:816000:818799 Pseudoalteromonas atlantica T6c, complete genome

Start: 818799, End: 820493, Length: 1695

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1738500:1756231175623117579521722Pseudomonas syringae pv. syringae B728a, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)0717
NC_004578:4432983:4438161443816144398821722Pseudomonas syringae pv. tomato str. DC3000, complete genomemalate dehydrogenase0716
NC_020063:2230000:2230359223035922320531695Enterobacteriaceae bacterium strain FGI 57, complete genomemalic enzyme0707
NC_012917:1740542:1744084174408417457811698Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)0699
NC_013941:1857724:1879501187950118812251725Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNAD-dependent malic enzyme0697
NC_013508:1262333:1262333126233312640301698Edwardsiella tarda EIB202, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating)0696
NC_012880:2871480:2871480287148028731771698Dickeya dadantii Ech703, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)0696
NC_005966:159232:1650441650441667441701Acinetobacter sp. ADP1, complete genomeNAD-linked malate dehydrogenase, Rossman fold0694
NC_011750:1809943:1831114183111418328111698Escherichia coli IAI39 chromosome, complete genomemalate dehydrogenase0694
NC_012912:2901021:2903703290370329054001698Dickeya zeae Ech1591, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)0694
NC_002695:2056545:2075215207521520769391725Escherichia coli O157:H7 str. Sakai, complete genomeNAD-linked malate dehydrogenase0691
NC_013008:1971662:1988791198879119904881698Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemalate dehydrogenase0691
NC_011353:1971145:1989815198981519915121698Escherichia coli O157:H7 str. EC4115 chromosome, complete genomemalate dehydrogenase0691
NC_014500:1862000:1915571191557119172681698Dickeya dadantii 3937 chromosome, complete genomemalate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme)0687
NC_005139:2201820:2264429226442922661081680Vibrio vulnificus YJ016 chromosome I, complete sequencemalic enzyme0640
NC_006526:1976779:2009459200945920111621704Zymomonas mobilis subsp. mobilis ZM4, complete genomemalic enzyme2e-172605
NC_013861:469500:4911494911494928581710Legionella longbeachae NSW150, complete genomemalate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme)8e-139494
NC_016582:10287865:1028786510287865102895441680Streptomyces bingchenggensis BCW-1 chromosome, complete genomemalate dehydrogenase3e-133476
NC_010511:1351000:1365438136543813671471710Methylobacterium sp. 4-46 chromosome, complete genomemalate dehydrogenase1e-122440
NC_014622:3525017:3542720354272035444441725Paenibacillus polymyxa SC2 chromosome, complete genomemalate dehydrogenase2e-114413
NC_014483:3235968:3252383325238332541011719Paenibacillus polymyxa E681 chromosome, complete genomeProbable NAD-dependent malic enzyme 2 (NAD-ME 2)7e-113408
NC_001263:2574755:2590824259082425925601737Deinococcus radiodurans R1 chromosome 1, complete sequencemalate oxidoreductase9e-110397
NC_016941:807155:8105388105388121721635Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative malolactic enzyme6e-108391
NC_013740:15401:1540115401170441644Acidaminococcus fermentans DSM 20731, complete genomeMalate dehydrogenase (oxaloacetate- decarboxylating)6e-106385
NC_012207:2573562:2574975257497525766211647Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative [NAD] dependent malate oxidoreductase8e-105381
NC_016804:2560000:2561568256156825632141647Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative [NAD] dependent malate oxidoreductase8e-105381
NC_009785:387910:4039814039814056061626Streptococcus gordonii str. Challis substr. CH1, complete genomemalate oxidoreductase8e-105381
NC_004757:427483:4754004754004771421743Nitrosomonas europaea ATCC 19718, complete genomeputative malate oxidoreductase (malic enzyme)6e-104378
NC_020995:3252500:3269077326907732706991623Enterococcus casseliflavus EC20, complete genomemalolactic enzyme7e-102371
NC_014311:1309562:1325508132550813271721665Ralstonia solanacearum PSI07 chromosome, complete genomemalate dehydrogenase3e-98359
NC_014654:188835:2017552017552029811227Halanaerobium sp. 'sapolanicus' chromosome, complete genomemalic protein NAD-binding protein2e-1480.9
NC_004668:3184319:3202675320267532038471173Enterococcus faecalis V583, complete genomemalic enzyme family protein6e-1479.7
NC_015573:162000:1751471751471763221176Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomemalic protein NAD-binding protein6e-1376.3
NC_016605:233087:2482432482432494031161Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeMalate dehydrogenase (Oxaloacetate-decarboxylase)7e-1376.3
NC_009073:529148:5355925355925368961305Pyrobaculum calidifontis JCM 11548, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)8e-1375.9
NC_009465:766893:7880017880017892211221Candidatus Vesicomyosocius okutanii HA, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)7e-1375.9
NC_015573:162000:1765121765121777681257Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeMalate dehydrogenase9e-1375.5
NC_015435:21736:2698826988282741287Metallosphaera cuprina Ar-4 chromosome, complete genomemalic enzyme (NAD+)1e-1275.1
NC_014654:188835:2031072031072043391233Halanaerobium sp. 'sapolanicus' chromosome, complete genomemalic protein NAD-binding protein1e-1275.1
NC_015499:197945:2010342010342022631230Thermodesulfobium narugense DSM 14796 chromosome, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-1275.1
NC_014729:800892:8186728186728209182247Halogeometricum borinquense DSM 11551 chromosome, complete genomeallosteric nADP-dependent malic enzyme3e-1273.9
NC_009697:275919:2851732851732863451173Clostridium botulinum A str. ATCC 19397 chromosome, completemalic enzyme3e-1273.9
NC_009495:280000:2921732921732933451173Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemalic enzyme3e-1273.9
NC_017316:2710021:2724037272403727252691233Enterococcus faecalis OG1RF chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-1172.4
NC_006369:734080:7661827661827674171236Legionella pneumophila str. Lens, complete genomehypothetical protein1e-1172
NC_009439:574437:5770145770145782821269Pseudomonas mendocina ymp, complete genomemalate dehydrogenase1e-1172
NC_014125:766576:7895577895577907921236Legionella pneumophila 2300/99 Alcoy chromosome, complete genomemalate dehydrogenase1e-1172
NC_009494:775676:8035188035188047531236Legionella pneumophila str. Corby chromosome, complete genomemalate oxidoreductase1e-1172
NC_016641:3217201:3238491323849132399091419Paenibacillus terrae HPL-003 chromosome, complete genomemalate dehydrogenase1e-1171.6
NC_009714:74500:9479194791960381248Campylobacter hominis ATCC BAA-381, complete genomeNADP-dependent malic enzyme (NADP-me)2e-1171.2
NC_015389:616430:6731096731096742721164Coriobacterium glomerans PW2 chromosome, complete genomemalic protein NAD-binding protein2e-1170.9
NC_015732:3145634:3160857316085731623081452Spirochaeta caldaria DSM 7334 chromosome, complete genomeMalate dehydrogenase2e-1170.9
NC_006368:750356:7805267805267817611236Legionella pneumophila str. Paris, complete genomehypothetical protein4e-1170.1
NC_002942:675829:6980596980596992941236Legionella pneumophila subsp. pneumophila str. Philadelphia 1,malate oxidoreductase4e-1170.1
NC_015410:617020:6193226193226205901269Pseudomonas mendocina NK-01 chromosome, complete genomemalate dehydrogenase4e-1170.1
NC_014933:3791840:3794621379462137969152295Bacteroides helcogenes P 36-108 chromosome, complete genomeallosteric NADP-dependent malic enzyme5e-1169.7
NC_010483:363525:3851643851643862941131Thermotoga sp. RQ2, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)8e-1169.3
NC_007645:6096345:6112046611204661133171272Hahella chejuensis KCTC 2396, complete genomeMalic enzyme7e-1169.3
NC_009486:346665:3671263671263682561131Thermotoga petrophila RKU-1 chromosome, complete genomemalate dehydrogenase7e-1169.3
NC_013169:1058463:1070634107063410721151482Kytococcus sedentarius DSM 20547, complete genomemalic enzyme7e-1169.3
NC_009434:608765:6123516123516136191269Pseudomonas stutzeri A1501, complete genomemalic enzyme6e-1169.3
NC_015740:636667:6402536402536415211269Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completemalic enzyme6e-1169.3
NC_010511:1351000:1367306136730613696152310Methylobacterium sp. 4-46 chromosome, complete genomemalic enzyme1e-1068.9
NC_009440:21947:2720027200284861287Metallosphaera sedula DSM 5348 chromosome, complete genomemalate dehydrogenase1e-1068.9
NC_014393:503230:5047675047675059361170Clostridium cellulovorans 743B chromosome, complete genomemalic protein NAD-binding1e-1068.6
NC_013861:728648:7486447486447500681425Legionella longbeachae NSW150, complete genomeNADP-dependent malic enzyme1e-1068.6
NC_017275:2283074:2297478229747822987611284Sulfolobus islandicus HVE10/4 chromosome, complete genomemalate dehydrogenase1e-1068.2
NC_017276:2161535:2175939217593921772221284Sulfolobus islandicus REY15A chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-1068.2
NC_012726:2249831:2264069226406922653521284Sulfolobus islandicus M.16.4 chromosome, complete genomemalate dehydrogenase1e-1068.2
NC_012588:2249874:2263808226380822651061299Sulfolobus islandicus M.14.25 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-1068.2
NC_012632:2352784:2367019236701923683171299Sulfolobus islandicus M.16.27 chromosome, complete genomemalate dehydrogenase1e-1068.2
NC_012589:2379709:2395130239513023964281299Sulfolobus islandicus L.S.2.15, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))2e-1067.8
NC_013769:2363980:2378202237820223795001299Sulfolobus islandicus L.D.8.5 chromosome, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)3e-1067.4
NC_012623:277113:2817682817682830661299Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))3e-1067.4
NC_002754:2621884:2623145262314526244431299Sulfolobus solfataricus P2, complete genomeNAD-dependent malic enzyme (malate oxidoreductase)3e-1067.4
NC_011725:4562709:4571642457164245728801239Bacillus cereus B4264 chromosome, complete genomemalate dehydrogenase4e-1067
NC_014171:4447856:4460580446058044618181239Bacillus thuringiensis BMB171 chromosome, complete genomeNAD-dependent malic enzyme4e-1067
NC_004557:2607073:2615397261539726165721176Clostridium tetani E88, complete genomeNAD-dependent malic enzyme4e-1067
NC_008044:3024125:3046844304684430490992256Silicibacter sp. TM1040, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase4e-1067
NC_007802:179780:2027042027042049682265Jannaschia sp. CCS1, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase4e-1066.6
NC_010184:4425676:4437309443730944385471239Bacillus weihenstephanensis KBAB4, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)4e-1066.6
NC_020291:4033000:4034879403487940360631185Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeNAD-dependent malic enzyme5e-1066.6
NC_017200:4401945:4415725441572544169631239Bacillus thuringiensis serovar finitimus YBT-020 chromosome,malate dehydrogenase5e-1066.6
NC_009674:3344000:3357255335725533584931239Bacillus cytotoxicus NVH 391-98 chromosome, complete genomemalate dehydrogenase6e-1066.2
NC_014935:1223817:1263484126348412647851302Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemalic protein nad-binding protein1e-0965.5
NC_014315:352395:3568623568623581781317Nitrosococcus watsoni C-113 chromosome, complete genomemalate dehydrogenase9e-1065.5
NC_012472:4400420:4409322440932244105601239Bacillus cereus 03BB102, complete genomeputative malate dehydrogenase2e-0964.7
NC_005945:4399756:4412453441245344136911239Bacillus anthracis str. Sterne, complete genomemalate dehydrogenase, putative2e-0964.7
NC_014335:4327584:4340271434027143415091239Bacillus cereus biovar anthracis str. CI chromosome, completemalate dehydrogenase2e-0964.7
NC_011658:4379274:4389548438954843907861239Bacillus cereus AH187 chromosome, complete genomeputative malate dehydrogenase2e-0964.7
NC_011773:4461758:4473497447349744747351239Bacillus cereus AH820 chromosome, complete genomeputative malate dehydrogenase2e-0964.7
NC_012659:4399094:4411791441179144130291239Bacillus anthracis str. A0248, complete genomeputative malate dehydrogenase2e-0964.7
NC_007530:4400152:4411891441189144130991209Bacillus anthracis str. 'Ames Ancestor', complete genomemalate dehydrogenase, putative3e-0964.3
NC_003997:4399067:4411764441176444129721209Bacillus anthracis str. Ames, complete genomemalate dehydrogenase, putative3e-0964.3
NC_006274:4448293:4460171446017144613791209Bacillus cereus E33L, complete genomemalate dehydrogenase (malic enzyme, NAD-malic enzyme)3e-0964.3
NC_016771:4333000:4343331434333143445391209Bacillus cereus NC7401, complete genomemalate dehydrogenase3e-0964.3
NC_013595:9149273:9161834916183491630271194Streptosporangium roseum DSM 43021, complete genomeMalate dehydrogenase (oxaloacetate- decarboxylating)2e-0964.3
NC_016935:517054:5170545170545184571404Paenibacillus mucilaginosus 3016 chromosome, complete genomeNAD-dependent malic enzyme2e-0964.3
NC_016779:4361140:4373981437398143752161236Bacillus cereus F837/76 chromosome, complete genomeNADP-dependent malic enzyme3e-0963.9
NC_021150:4350461:4366419436641943676631245Azotobacter vinelandii CA6, complete genomemalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)4e-0963.5
NC_012560:4350465:4366423436642343676671245Azotobacter vinelandii DJ, complete genomemalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)4e-0963.5
NC_008578:1827605:1852077185207718535911515Acidothermus cellulolyticus 11B, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating)5e-0963.2
NC_010002:2293670:2308601230860123108982298Delftia acidovorans SPH-1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase9e-0962.4
NC_015563:5162177:5167308516730851696052298Delftia sp. Cs1-4 chromosome, complete genomemalic protein NAD-binding protein9e-0962.4
NC_008340:277223:2797642797642820942331Alkalilimnicola ehrlichei MLHE-1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))1e-0862
NC_014830:3156873:3175936317593631773661431Intrasporangium calvum DSM 43043 chromosome, complete genomemalic protein NAD-binding protein2e-0861.2
NC_007484:266594:2686362686362698411206Nitrosococcus oceani ATCC 19707, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)3e-0860.8
NC_004337:2548288:2564093256409325663722280Shigella flexneri 2a str. 301, complete genomephosphate acetyltransferase5e-0860.1
NC_008258:2542863:2559907255990725621862280Shigella flexneri 5 str. 8401, complete genomeputative multimodular enzyme5e-0860.1
NC_004741:2526421:2542226254222625445052280Shigella flexneri 2a str. 2457T, complete genomephosphate acetyltransferase5e-0860.1
NC_017328:2586171:2601731260173126040102280Shigella flexneri 2002017 chromosome, complete genomeputative multimodular enzyme5e-0860.1
NC_019970:336472:3452833452833465001218Thermoanaerobacterium thermosaccharolyticum M0795, complete genomemalic enzyme6e-0859.7
NC_015656:1653450:1677983167798316795151533Frankia symbiont of Datisca glomerata chromosome, complete genomemalic protein NAD-binding protein7e-0859.3
NC_019960:659756:6597566597566620442289Prevotella dentalis DSM 3688 chromosome 1, complete sequencemalic enzyme8e-0859.3
NC_004663:2437760:2472243247224324745342292Bacteroides thetaiotaomicron VPI-5482, complete genomeNADP-dependent malate dehydrogenase2e-0758.2
NC_016048:3063888:3103309310330931044841176Oscillibacter valericigenes Sjm18-20, complete genomeNADP-dependent malic enzyme2e-0758.2
NC_012883:104987:1247401247401260621323Thermococcus sibiricus MM 739, complete genomeMalate oxidoreductase1e-0758.2
NC_000911:96325:99402994021007931392Synechocystis sp. PCC 6803, complete genomemalic enzyme2e-0757.8
NC_017039:96325:99402994021007931392Synechocystis sp. PCC 6803 substr. PCC-P, complete genomemalic enzyme2e-0757.8
NC_017052:96325:99402994021007931392Synechocystis sp. PCC 6803 substr. PCC-N, complete genomemalic enzyme2e-0757.8
NC_017277:96325:99402994021007931392Synechocystis sp. PCC 6803, complete genomemalic enzyme2e-0757.8
NC_009615:2039964:2051646205164620539342289Parabacteroides distasonis ATCC 8503 chromosome, complete genomemalic enzyme3e-0757.4
NC_017059:376226:3940493940493963822334Rhodospirillum photometricum DSM 122, complete genomemalate dehydrogenase3e-0757.4
NC_012880:3748665:3764211376421137664902280Dickeya dadantii Ech703, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase3e-0757.4
NC_015761:2444833:2444833244483324471122280Salmonella bongori NCTC 12419, complete genomeNADP-dependent malate dehydrogenase4e-0757
NC_014733:2201485:2218770221877022199841215Methylovorus sp. MP688 chromosome, complete genomemalate dehydrogenase (oxaloacetate-decarboxylating) (nadp(+))4e-0757
NC_012029:1525929:1543576154357615458282253Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomemalate dehydrogenase9e-0755.8
NC_014924:2961970:2974388297438829766822295Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomemalic protein NAD-binding protein8e-0755.8
NC_009708:1497898:1497898149789815001772280Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemalic enzyme1e-0655.5
NC_006155:3237990:3254726325472632570052280Yersinia pseudotuberculosis IP 32953, complete genomephosphate acetyltransferase1e-0655.5
NC_010634:3155741:3172658317265831749372280Yersinia pseudotuberculosis PB1/+, complete genomephosphate acetyl/butaryl transferase1e-0655.5
NC_014365:2359760:2374217237421723764722256Desulfarculus baarsii DSM 2075 chromosome, complete genomemalic protein NAD-binding protein2e-0654.7
NC_008269:868000:8966908966908978861197Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencemalate dehydrogenase (oxaloacetate decarboxylating)3e-0654.3