Pre_GI: BLASTP Hits

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Query: NC_008044:1401814:1401814 Silicibacter sp. TM1040, complete genome

Start: 1401814, End: 1402140, Length: 327

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011963:1979136:198108219810821981477396Rhodobacter sphaeroides KD131 chromosome 1, complete sequencehypothetical protein2e-22104
NC_003911:1078949:108157810815781081838261Silicibacter pomeroyi DSS-3, complete genomehypothetical protein2e-1994
NC_009667:1203861:122492112249211225178258Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein5e-1373.2
NC_009720:4087831:409813340981334098429297Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-0857.8
NC_010172:57500:921489214892423276Methylobacterium extorquens PA1, complete genomehypothetical protein8e-0752.4
NC_011757:39881:738007380074081282Methylobacterium chloromethanicum CM4, complete genomehypothetical protein9e-0752.4
NC_017059:2836000:283995928399592840156198Rhodospirillum photometricum DSM 122, complete genomehypothetical protein9e-0752.4
NC_008783:145305:147131147131147388258Bartonella bacilliformis KC583, complete genomehypothetical protein1e-0548.9