Pre_GI: BLASTP Hits

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Query: NC_007951:1928906:1940221 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1940221, End: 1941288, Length: 1068

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007953:938346:9512549512549523511098Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family5e-38158
NC_009076:2027478:2031294203129420323941101Burkholderia pseudomallei 1106a chromosome I, complete sequenceouter membrane porin2e-34146
NC_007434:2424884:2430377243037724314771101Burkholderia pseudomallei 1710b chromosome I, complete sequenceouter membrane porin2e-34146
NC_006350:1938631:1953075195307519541751101Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative outer membrane porin protein precursor2e-34146
NC_012721:710887:7333207333207344651146Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane porin OpcP3e-33142
NC_010676:2658495:2668504266850426695831080Burkholderia phytofirmans PsJN chromosome 2, complete sequenceporin Gram-negative type5e-33142
NC_007953:938346:9440889440889451521065Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family2e-32140
NC_010676:2658495:2671058267105826722031146Burkholderia phytofirmans PsJN chromosome 2, complete sequenceporin Gram-negative type1e-31137
NC_014118:1331164:1353407135340713545671161Burkholderia sp. CCGE1002 chromosome chromosome 2, completeporin Gram-negative type8e-31134
NC_010681:74587:8977489774909311158Burkholderia phytofirmans PsJN chromosome 1, complete sequenceporin Gram-negative type2e-30133
NC_007953:504939:5124385124385136191182Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family5e-30132
NC_007953:572926:5905215905215916211101Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family1e-29130
NC_008543:61000:7741577415785871173Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceporin, Gram-negative type7e-29128
NC_010676:2793237:2818389281838928195761188Burkholderia phytofirmans PsJN chromosome 2, complete sequenceporin Gram-negative type8e-29128
NC_007511:3512100:3519221351922135203451125Burkholderia sp. 383 chromosome 2, complete sequenceouter membrane protein (porin)8e-29127
NC_007511:1147696:1151417115141711525021086Burkholderia sp. 383 chromosome 2, complete sequenceouter membrane protein (porin)9e-29127
NC_007434:2449721:2463412246341224645751164Burkholderia pseudomallei 1710b chromosome I, complete sequenceouter membrane porin3e-28126
NC_006350:1909639:1917834191783419189521119Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative outer membrane porin protein3e-28126
NC_007953:1088933:1094515109451510957411227Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family1e-27124
NC_007952:3283394:3287475328747532886171143Burkholderia xenovorans LB400 chromosome 2, complete sequenceouter membrane porin, OmpC family1e-27124
NC_011001:2085986:2141476214147621425551080Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative porin2e-27123
NC_010515:2691000:2692769269276926938571089Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceporin Gram-negative type2e-27123
NC_016625:171341:1904091904091915451137Burkholderia sp. YI23 chromosome 2, complete sequenceporin5e-27122
NC_007953:938346:9609829609829621421161Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family2e-26120
NC_014323:4665610:4708813470881347100241212Herbaspirillum seropedicae SmR1 chromosome, complete genomeporin transmembrane protein3e-26119
NC_007951:1711223:1731085173108517322481164Burkholderia xenovorans LB400 chromosome 1, complete sequenceouter membrane porin, OmpC family2e-25117
NC_007953:314872:3276093276093287841176Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family1e-25117
NC_014539:743523:7803067803067814871182Burkholderia sp. CCGE1003 chromosome 1, complete sequenceporin Gram-negative type9e-26117
NC_007510:1959883:1972717197271719739551239Burkholderia sp. 383 chromosome 1, complete sequenceouter membrane protein, (porin)9e-26117
NC_010623:72500:9548995489966281140Burkholderia phymatum STM815 chromosome 2, complete sequenceporin Gram-negative type2e-25116
NC_007952:3283394:3297424329742432985631140Burkholderia xenovorans LB400 chromosome 2, complete sequenceouter membrane porin, OmpC family6e-25115
NC_009255:351695:3700983700983712551158Burkholderia vietnamiensis G4 chromosome 2, complete sequenceporin9e-25114
NC_007510:2284000:2286561228656122876071047Burkholderia sp. 383 chromosome 1, complete sequenceouter membrane protein, (porin)1e-24114
NC_015136:2282488:2299708229970823008591152Burkholderia sp. CCGE1001 chromosome 1, complete sequenceporin1e-24114
NC_007511:3080849:3093960309396030950481089Burkholderia sp. 383 chromosome 2, complete sequenceouter membrane protein (porin)8e-24111
NC_015376:662844:6854096854096865631155Burkholderia gladioli BSR3 chromosome chromosome 2, completeporin4e-23109
NC_009256:1282793:1303069130306913042141146Burkholderia vietnamiensis G4 chromosome 1, complete sequenceporin3e-23109
NC_008314:2744553:2770865277086527720401176Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane porin protein precursor3e-23109
NC_007953:811500:8185768185768196311056Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family4e-23108
NC_015136:1101725:1124242112424211253331092Burkholderia sp. CCGE1001 chromosome 1, complete sequenceouter membrane protein (porin)1e-22107
NC_010623:1871492:1903076190307619042331158Burkholderia phymatum STM815 chromosome 2, complete sequenceporin, gram-negative type1e-22107
NC_007953:1043957:1049440104944010505671128Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family1e-22107
NC_007953:353496:3581253581253592671143Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family1e-22107
NC_016589:1064575:1086600108660010877241125Burkholderia sp. YI23 chromosome 1, complete sequenceporin2e-22107
NC_008543:259450:2655962655962666841089Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceporin, Gram-negative type2e-22107
NC_008391:2253188:2256047225604722571351089Burkholderia cepacia AMMD chromosome 2, complete sequenceporin, Gram-negative type3e-22106
NC_010552:293703:2980362980362991241089Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceporin Gram-negative type8e-22104
NC_009255:1105786:1136379113637911376471269Burkholderia vietnamiensis G4 chromosome 2, complete sequenceporin3e-21102
NC_010805:575709:5867825867825880501269Burkholderia multivorans ATCC 17616 chromosome 2, completeouter membrane porin3e-21102
NC_010086:1816378:1887254188725418885221269Burkholderia multivorans ATCC 17616 chromosome 2, completeporin Gram-negative type3e-21102
NC_015376:3249773:3251256325125632524581203Burkholderia gladioli BSR3 chromosome chromosome 2, completeOmpC family outer membrane porin3e-21102
NC_012721:770651:7807217807217818001080Burkholderia glumae BGR1 chromosome 2, complete genomePorin, Gram-negative type6e-21102
NC_012856:3000839:3019932301993230210561125Ralstonia pickettii 12D chromosome 1, complete genomeporin Gram-negative type2e-20100
NC_010086:1907959:1908815190881519098881074Burkholderia multivorans ATCC 17616 chromosome 2, completeporin Gram-negative type1e-20100
NC_009255:1105786:1111091111109111121641074Burkholderia vietnamiensis G4 chromosome 2, complete sequenceporin1e-20100
NC_010625:1415500:1433564143356414347841221Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceporin Gram-negative type4e-2099
NC_016626:1699500:1717781171778117188991119Burkholderia sp. YI23 plasmid byi_1p, complete sequenceouter membrane porin OpcP4e-2099
NC_011000:2732330:2746484274648427476561173Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative outer membrane protein7e-2098.2
NC_009079:705931:722484722484723272789Burkholderia mallei NCTC 10247 chromosome I, complete sequence1e-1997.8
NC_008835:2133696:215025421502542150964711Burkholderia mallei NCTC 10229 chromosome I, complete sequence1e-1997.8
NC_010676:304405:3124093124093134551047Burkholderia phytofirmans PsJN chromosome 2, complete sequenceporin Gram-negative type1e-1997.8
NC_006349:1630514:163547516354751636311837Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceporin, interruption-N1e-1997.4
NC_012856:2931995:2949495294949529505591065Ralstonia pickettii 12D chromosome 1, complete genomeporin Gram-negative type1e-1997.4
NC_010801:421906:4270734270734281821110Burkholderia multivorans ATCC 17616 chromosome 3, completeouter membrane porin2e-1996.7
NC_014718:791528:8076268076268087591134Burkholderia rhizoxinica HKI 454 chromosome, complete genomeOuter membrane porin protein 32 precursor2e-1996.7
NC_014118:987889:1000266100026610013631098Burkholderia sp. CCGE1002 chromosome chromosome 2, completeporin Gram-negative type1e-1894.7
NC_015726:1813961:1818329181832918194231095Cupriavidus necator N-1 chromosome 1, complete sequenceporin1e-1894.4
NC_015563:2702787:2715686271568627168371152Delftia sp. Cs1-4 chromosome, complete genomeporin7e-1891.7
NC_010682:3313944:3358489335848933595951107Ralstonia pickettii 12J chromosome 1, complete sequenceporin Gram-negative type2e-1790.1
NC_014307:533975:5339755339755351231149Ralstonia solanacearum CFBP2957 chromosome, complete genomeporin4e-1789.4
NC_010625:1602191:1624134162413416252641131Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceporin Gram-negative type3e-1789.4
NC_010805:1642978:1667004166700416682091206Burkholderia multivorans ATCC 17616 chromosome 2, completeouter membrane porin5e-1789
NC_007974:785216:7935927935927947071116Ralstonia metallidurans CH34 chromosome 2, complete sequenceporin, Gram-negative type6e-1788.6
NC_015563:3401867:3405493340549334066711179Delftia sp. Cs1-4 chromosome, complete genomeporin6e-1788.6
NC_010002:4175809:4190075419007541912531179Delftia acidovorans SPH-1, complete genomeporin Gram-negative type7e-1788.6
NC_015563:4629436:4634320463432046354231104Delftia sp. Cs1-4 chromosome, complete genomeporin8e-1788.2
NC_003296:1980687:1998915199891520000391125Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE PORIN SIGNAL PEPTIDE PROTEIN1e-1687.4
NC_007509:644000:6469396469396481231185Burkholderia sp. 383 chromosome 3, complete sequenceouter membrane protein (porin)3e-1686.7
NC_007347:1239982:1258663125866312597541092Ralstonia eutropha JMP134 chromosome 1, complete sequencePorin, Gram-negative type3e-1686.7
NC_008314:2744553:2779044277904427801711128Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein (porin)4e-1685.9
NC_008781:1426285:1441308144130814423661059Polaromonas naphthalenivorans CJ2, complete genomeporin, Gram-negative type9e-1684.7
NC_007953:1043957:1066677106667710679091233Burkholderia xenovorans LB400 chromosome 3, complete sequenceouter membrane porin, OmpC family2e-1583.6
NC_006351:2759708:2798378279837827994571080Burkholderia pseudomallei K96243 chromosome 2, complete sequenceporin protein6e-1582
NC_008542:197500:1999051999052010621158Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceouter membrane protein (porin)1e-1480.9
NC_008060:1346581:1364076136407613652601185Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceporin, Gram-negative type2e-1480.5
NC_008544:818730:8187308187308199141185Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceporin, Gram-negative type2e-1480.5
NC_008543:2474002:2493348249334824944991152Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceporin, Gram-negative type4e-1479.3
NC_008786:1507139:1535487153548715365931107Verminephrobacter eiseniae EF01-2, complete genomeporin, Gram-negative type9e-1478.2
NC_010625:1415500:1426074142607414272251152Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceouter membrane porin, OmpC family8e-1478.2
NC_008391:865340:8773108773108784191110Burkholderia cepacia AMMD chromosome 2, complete sequenceporin, Gram-negative type1e-1377.8
NC_010086:1816378:1816378181637818175291152Burkholderia multivorans ATCC 17616 chromosome 2, completeporin Gram-negative type1e-1377.8
NC_019814:678404:6901846901846913711188Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonasouter membrane porin protein precursor2e-1377
NC_020299:532000:5502945502945514811188Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeporin4e-1376.3
NC_010170:4800000:4873063487306348742201158Bordetella petrii, complete genomeOuter membrane porin protein precursor4e-1375.9
NC_015137:2616222:2634245263424526353961152Burkholderia sp. CCGE1001 chromosome 2, complete sequenceporin5e-1375.9
NC_010515:1205258:1213385121338512144191035Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceporin Gram-negative type6e-1375.5
NC_011662:1160887:1166632116663211677501119Thauera sp. MZ1T, complete genomeporin Gram-negative type5e-1375.5
NC_014640:4532095:4536552453655245377091158Achromobacter xylosoxidans A8 chromosome, complete genomeporin5e-1375.5
NC_007509:3668:7308730885611254Burkholderia sp. 383 chromosome 3, complete sequenceouter membrane protein, (porin)-like5e-1375.5
NC_007509:1383013:7308730885611254Burkholderia sp. 383 chromosome 3, complete sequenceouter membrane protein, (porin)-like5e-1375.5
NC_007974:2323436:2331528233152823325861059Ralstonia metallidurans CH34 chromosome 2, complete sequenceporin, Gram-negative type1e-1274.7
NC_015723:430165:4397824397824408341053Cupriavidus necator N-1 chromosome 2, complete sequenceouter membrane porin1e-1274.3
NC_008786:5128363:5136480513648051376431164Verminephrobacter eiseniae EF01-2, complete genomeporin, gram-negative type1e-1274.3
NC_010645:369408:3738093738093748941086Bordetella avium 197N, complete genomeouter membrane porin protein3e-1273.2
NC_014307:2735934:2757799275779927588841086Ralstonia solanacearum CFBP2957 chromosome, complete genomeporin3e-1273.2
NC_009255:2044291:2063169206316920643561188Burkholderia vietnamiensis G4 chromosome 2, complete sequenceOmpC family outer membrane porin3e-1272.8
NC_010681:1234500:1260981126098112621321152Burkholderia phytofirmans PsJN chromosome 1, complete sequenceouter membrane porin, OmpC family4e-1272.4
NC_013446:1648556:1671015167101516721391125Comamonas testosteroni CNB-2, complete genomegram-negative type outer membrane porin protein4e-1272.4
NC_007348:2519447:2539710253971025408461137Ralstonia eutropha JMP134 chromosome 2, complete sequencePorin, Gram-negative type8e-1271.6
NC_012791:651480:6661536661536673551203Variovorax paradoxus S110 chromosome 1, complete genomeporin Gram-negative type8e-1271.6
NC_011001:302500:3205503205503215841035Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative porin1e-1171.2
NC_011662:1160887:1182134118213411832461113Thauera sp. MZ1T, complete genomeporin Gram-negative type1e-1170.9
NC_007974:2097334:2100263210026321014021140Ralstonia metallidurans CH34 chromosome 2, complete sequenceporin, Gram-negative type1e-1170.9
NC_010002:1879220:1919523191952319205691047Delftia acidovorans SPH-1, complete genomeporin, gram-negative type2e-1170.1
NC_008061:2193000:2197260219726021983331074Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceporin, Gram-negative type3e-1169.7
NC_008543:61000:6998469984710571074Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceporin, Gram-negative type3e-1169.7
NC_008314:1202963:1217410121741012185071098Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein (porin)3e-1169.7
NC_009659:543000:5563015563015573951095Janthinobacterium sp. Marseille chromosome, complete genomeporin5e-1168.9
NC_012792:627500:6303346303346316291296Variovorax paradoxus S110 chromosome 2, complete genomeporin8e-1168.2
NC_015726:1813961:1827205182720518283261122Cupriavidus necator N-1 chromosome 1, complete sequenceouter membrane protein porin-like protein8e-1168.2
NC_016616:134449:1705971705971716821086Dechlorosoma suillum PS chromosome, complete genomeouter membrane protein (porin)1e-1068.2
NC_008825:3298506:3304126330412633054331308Methylibium petroleiphilum PM1, complete genomeputative outer membrane protein (porin)2e-1067
NC_014118:1592000:1598498159849815996851188Burkholderia sp. CCGE1002 chromosome chromosome 2, completeputative outer membrane porin protein1e-0964.7
NC_015724:129331:1319921319921331821191Cupriavidus necator N-1 plasmid BB2p, complete sequenceporin1e-0964.3
NC_014118:1592000:1607172160717216082601089Burkholderia sp. CCGE1002 chromosome chromosome 2, completeporin1e-0964.3
NC_014914:1092546:1095518109551810966751158Taylorella equigenitalis MCE9 chromosome, complete genomeOuter membrane protein (porin)1e-0963.9
NC_007974:1717828:1736828173682817379431116Ralstonia metallidurans CH34 chromosome 2, complete sequenceporin, Gram-negative type4e-0962.8
NC_019815:114288:1309671309671321511185Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiouter membrane porin protein precursor5e-0962.4
NC_011035:2027916:2049351204935120503971047Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeouter membrane protein I9e-0961.6
NC_002946:1786000:1788698178869817897441047Neisseria gonorrhoeae FA 1090, complete genomemajor outer membrane protein porin P.IB1e-0861.2
NC_012559:978419:9921059921059932291125Laribacter hongkongensis HLHK9, complete genomeProbable outer membrane porin5e-0858.9
NC_008313:2629281:2641638264163826427111074Ralstonia eutropha H16 chromosome 1, complete sequenceouter membrane protein (porin)7e-0858.5
NC_013446:2919005:2943400294340029444071008Comamonas testosteroni CNB-2, complete genomegram-negative type outer membrane porin protein1e-0757.8
NC_015723:280368:2953152953152964631149Cupriavidus necator N-1 chromosome 2, complete sequenceouter membrane porin2e-0757
NC_010120:144000:159864159864160862999Neisseria meningitidis 053442, complete genomeporin, major outer membrane protein P.I2e-0757
NC_007948:4620661:4624654462465446257211068Polaromonas sp. JS666, complete genomeputative porin precursor transmembrane protein5e-0755.5
NC_015726:406450:4197094197094207851077Cupriavidus necator N-1 chromosome 1, complete sequenceouter membrane protein2e-0653.5
NC_015856:4342500:435112043511204351521402Collimonas fungivorans Ter331 chromosome, complete genomeouter membrane porin protein 32 ; putative 3-hydroxyphenylpropionic acid porine4e-0652.8