Pre_GI: BLASTP Hits

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Query: NC_007606:3755155:3759005 Shigella dysenteriae Sd197, complete genome

Start: 3759005, End: 3759895, Length: 891

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4567820:458275545827554583645891Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphate ABC transporter permease1e-156552
NC_011751:4373961:439019643901964391086891Escherichia coli UMN026 chromosome, complete genomephosphate permease PtsA1e-156552
NC_010498:4166903:418313141831314184021891Escherichia coli SMS-3-5, complete genomephosphate ABC transporter, permease protein PstA1e-156552
NC_002695:4678945:469525746952574696147891Escherichia coli O157:H7 str. Sakai, complete genomePstA1e-156552
NC_004337:3590323:383854038385403839430891Shigella flexneri 2a str. 301, complete genomehigh-affinity phosphate-specific transport protein1e-156552
NC_011750:4490573:450680245068024507692891Escherichia coli IAI39 chromosome, complete genomephosphate transporter permease subunit PtsA1e-156552
NC_011353:4782040:479835247983524799242891Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphate transporter permease subunit PtsA1e-156552
NC_013008:4738083:475439547543954755285891Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphate transporter permease subunit PtsA1e-156552
NC_002655:4747926:476423847642384765128891Escherichia coli O157:H7 EDL933, complete genomehigh-affinity phosphate-specific transport system6e-156550
NC_012912:4737703:475546847554684756355888Dickeya zeae Ech1591, complete genomephosphate ABC transporter, inner membrane subunit PstA3e-128457
NC_014500:4883794:488542748854274886314888Dickeya dadantii 3937 chromosome, complete genomephosphate ABC transporter membrane protein9e-128456
NC_010524:3094303:309729130972913098157867Leptothrix cholodnii SP-6, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-95349
NC_008702:1514707:152190215219021522681780Azoarcus sp. BH72, complete genomephosphate transport system permease protein probable.5e-91334
NC_009659:2523874:256203225620322562892861Janthinobacterium sp. Marseille chromosome, complete genomephosphate ABC transporter permease3e-84311
NC_015185:1114180:113648711364871137329843Desulfurobacterium thermolithotrophum DSM 11699 chromosome,phosphate ABC transporter, inner membrane subunit PstA1e-72273
NC_016027:346768:361049361049361945897Gluconacetobacter xylinus NBRC 3288, complete genomephosphate ABC transporter permease2e-67255
NC_010730:741842:772976772976773809834Sulfurihydrogenibium sp. YO3AOP1, complete genomephosphate ABC transporter, inner membrane subunit PstA7e-65247
NC_015064:1984662:198685119868511987726876Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA7e-60231
NC_009663:2363841:237516823751682375977810Sulfurovum sp. NBC37-1, complete genomephosphate ABC transporter, permease7e-53207
NC_013526:911909:926773926773927618846Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomephosphate ABC transporter, inner membrane subunit PstA6e-49194
NC_008319:1272251:127225112722511273153903Synechococcus sp. CC9311, complete genomephosphate ABC transporter, permease protein PtsA7e-43174
NC_009481:1109324:113450011345001135411912Synechococcus sp. WH 7803 chromosome, complete genomephosphate ABC transporter permease6e-40164
NC_013947:2351208:235438023543802355300921Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephosphate ABC transporter inner membrane subunit PstA5e-37155
NC_014218:253558:259239259239260156918Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-33143
NC_000854:1:290532905329907855Aeropyrum pernix K1, complete genomephosphate ABC transporter, permease protein9e-33140
NC_010545:1691999:1692969169296916941681200Corynebacterium urealyticum DSM 7109, complete genomephosphate ABC transport system, permease protein5e-32138
NC_014830:3275474:327547432754743276439966Intrasporangium calvum DSM 43043 chromosome, complete genomephosphate ABC transporter membrane protein 2, PhoT family3e-31135
NC_014376:386650:391873391873392781909Clostridium saccharolyticum WM1 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA3e-26119
NC_015474:182701:202179202179203006828Pyrococcus sp. NA2 chromosome, complete genomePstA phosphate ABC transporter, permease protein7e-26117
NC_013895:66641:838318383184700870Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completephosphate ABC transporter, permease protein PstA3e-25115
NC_006347:3166000:316679731667973167672876Bacteroides fragilis YCH46, complete genomeputative ABC transporter permease protein3e-25115
NC_003228:3212500:322817732281773229052876Bacteroides fragilis NCTC 9343, complete genomephosphate transport system permease protein3e-25115
NC_016776:3258939:326558532655853266460876Bacteroides fragilis 638R, complete genomephosphate transport system permease3e-25115
NC_009614:4844000:485117048511704852057888Bacteroides vulgatus ATCC 8482 chromosome, complete genomeABC transporter permease1e-24114
NC_002944:865425:897338897338898246909Mycobacterium avium subsp. paratuberculosis K-10, complete genomePstA1_21e-24114
NC_009922:315870:317777317777318598822Alkaliphilus oremlandii OhILAs, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-24112
NC_015389:905165:906110906110907006897Coriobacterium glomerans PW2 chromosome, complete genomephosphate ABC transporter membrane protein 2, PhoT family3e-24112
NC_014222:613448:6315046315046325111008Methanococcus voltae A3 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA6e-24111
NC_014122:1313303:478147815620840Methanocaldococcus infernus ME chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-23109
NC_021175:845370:847155847155848039885Streptococcus oligofermentans AS 1.3089, complete genomephosphate ABC transporter permease2e-22106
NC_014171:723155:729264729264730184921Bacillus thuringiensis BMB171 chromosome, complete genomephosphate ABC transporter permease5e-22105
NC_007681:402773:401931401931402776846Methanosphaera stadtmanae DSM 3091, complete genomePstA1e-21103
NC_009633:4733678:473651747365174737362846Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphate ABC transporter permease2e-21103
NC_010610:1385066:141306814130681413949882Lactobacillus fermentum IFO 3956, complete genomephosphate ABC transporter permease component3e-21102
NC_009012:1934107:193410719341071934982876Clostridium thermocellum ATCC 27405, complete genomephosphate ABC transporter, inner membrane subunit PstA8e-21100
NC_007929:428743:449157449157450047891Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphate transport system permease protein2e-2099.8
NC_007907:4692336:469695946969594697870912Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-2099
NC_015672:1921023:1921023192102319221861164Flexistipes sinusarabici DSM 4947 chromosome, complete genomephosphate ABC transporter inner membrane subunit PstA4e-2098.6
NC_008701:1363665:139202913920291392913885Pyrobaculum islandicum DSM 4184, complete genomebinding-protein-dependent transport systems inner membrane component8e-2097.8
NC_013665:1865122:188509218850921885940849Methanocella paludicola SANAE, complete genomephosphate ABC transporter permease protein8e-2097.8
NC_020291:1389114:140042614004261401310885Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphate ABC transporter permease protein 28e-2097.8
NC_010003:2134878:213564221356422136490849Petrotoga mobilis SJ95, complete genomephosphate ABC transporter, inner membrane subunit PstA1e-1997.4
NC_008554:840079:856285856285857130846Syntrophobacter fumaroxidans MPOB, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-1996.7
NC_010673:205500:2207312207312222721542Borrelia hermsii DAH, complete genomephosphate transport system permease protein PstA3e-1995.9
NC_013194:1955582:197644919764491977339891Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completephosphate ABC transporter, inner membrane subunit PstA4e-1995.5
NC_015222:2683056:270614227061422707068927Nitrosomonas sp. AL212 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstA4e-1995.5
NC_015731:3077842:310238031023803103306927Nitrosomonas sp. Is79A3 chromosome, complete genomephosphate ABC transporter inner membrane subunit PstA1e-1894
NC_003551:1678882:1689888168988816916721785Methanopyrus kandleri AV19, complete genomeABC-type phosphate transport system, permease component2e-1893.6
NC_016776:3258939:3266462326646232676581197Bacteroides fragilis 638R, complete genomeputative phosphate-related ABC transport system, membrane protein2e-1893.2
NC_006347:3166000:3167674316767431688701197Bacteroides fragilis YCH46, complete genomeputative ABC transporter permease protein2e-1893.2
NC_003228:3212500:3229054322905432302501197Bacteroides fragilis NCTC 9343, complete genomeputative phosphate-related ABC transport system, membrane protein2e-1893.2
NC_014246:1545214:1564445156444515655151071Mobiluncus curtisii ATCC 43063 chromosome, complete genomephosphate ABC transporter permease3e-1892.8
NC_009614:4844000:4852155485215548533421188Bacteroides vulgatus ATCC 8482 chromosome, complete genomeABC transporter permease1e-1790.5
NC_011244:213853:2334002334002349381539Borrelia recurrentis A1, complete genomephosphate ABC transporter, permease protein2e-1790.1
NC_011662:386162:434427434427435350924Thauera sp. MZ1T, complete genomephosphate ABC transporter, inner membrane subunit PstA1e-1687.4
NC_006831:849500:8774828774828787441263Ehrlichia ruminantium str. Gardel, complete genomePhosphate transport system permease protein pstA7e-1684.7
NC_011145:4628000:465607246560724656986915Anaeromyxobacter sp. K, complete genomephosphate ABC transporter, inner membrane subunit PstA1e-1584
NC_005295:873500:9023079023079035691263Ehrlichia ruminantium str. Welgevonden, complete genomeputative ABC transporter, membrane-spanning protein1e-1583.6
NC_006832:853500:8818698818698831311263Ehrlichia ruminantium str. Welgevonden, complete genomePhosphate transport system permease protein pstA1e-1583.6
NC_010525:500804:502992502992503873882Thermoproteus neutrophilus V24Sta, complete genomebinding-protein-dependent transport systems inner membrane component2e-1583.2
NC_009922:315870:316840316840317775936Alkaliphilus oremlandii OhILAs, complete genomephosphate ABC transporter, inner membrane subunit PstC4e-1582.4
NC_011662:386162:433484433484434410927Thauera sp. MZ1T, complete genomephosphate ABC transporter, inner membrane subunit PstC5e-1582
NC_009092:1935281:1953792195379219554441653Shewanella loihica PV-4, complete genomephosphate ABC transporter, inner membrane subunit PstA8e-1581.3
NC_007799:474931:4785434785434798111269Ehrlichia chaffeensis str. Arkansas, complete genomeputative phosphate ABC transporter, permease protein1e-1480.5
NC_016901:1885694:1888713188871318903711659Shewanella baltica OS678 chromosome, complete genomephosphate ABC transporter permease2e-1480.1
NC_013887:189400:191224191224192080857Methanocaldococcus sp. FS406-22 chromosome, complete genomehypothetical protein3e-1479.3
NC_015214:1458480:147648014764801477355876Lactobacillus acidophilus 30SC chromosome, complete genomeABC-type phosphate transport system, permease4e-1479
NC_009138:467268:4932454932454949001656Herminiimonas arsenicoxydans, complete genomeputative membrane protein component of ABC phosphate transporter pstA-like5e-1478.6
NC_015214:1458480:147736014773601478265906Lactobacillus acidophilus 30SC chromosome, complete genomephosphate ABC transporter permease pstc4e-1478.6
NC_006177:835459:857984857984858835852Symbiobacterium thermophilum IAM 14863, complete genomephosphate ABC transporter permease protein1e-1377.4
NC_009720:4367584:437651643765164377451936Xanthobacter autotrophicus Py2, complete genomephosphate ABC transporter, inner membrane subunit PstA2e-1377
NC_017278:258921:2869642869642881781215Thermus sp. CCB_US3_UF1 chromosome, complete genomephosphate transport system permease PstA2e-1376.6
NC_007929:428743:448240448240449157918Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphate transport system permease protein3e-1376.3
NC_007907:4692336:469786746978674698790924Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1375.5
NC_011145:4628000:4656983465698346579931011Anaeromyxobacter sp. K, complete genomephosphate ABC transporter, inner membrane subunit PstC5e-1375.1
NC_008554:840079:857130857130858041912Syntrophobacter fumaroxidans MPOB, complete genomephosphate ABC transporter, inner membrane subunit PstC3e-1272.8
NC_014246:1545214:1565512156551215665461035Mobiluncus curtisii ATCC 43063 chromosome, complete genomephosphate ABC transporter permease6e-1271.6
NC_003888:7561923:7576036757603675778471812Streptomyces coelicolor A3(2), complete genomeABC transporter permease protein1e-1170.9
NC_015389:905165:905165905165906103939Coriobacterium glomerans PW2 chromosome, complete genomephosphate ABC transporter membrane protein 1, PhoT family1e-1170.9
NC_009663:2363841:237597423759742376843870Sulfurovum sp. NBC37-1, complete genomephosphate ABC transporter, permease2e-1169.7
NC_011565:385454:386344386344387195852Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,ABC-type phosphate transporter permease component PstA3e-1169.3
NC_012880:3125261:3123618312361831252641647Dickeya dadantii Ech703, complete genomephosphate ABC transporter, inner membrane subunit PstA3e-1169.3
NC_014376:386650:392771392771393709939Clostridium saccharolyticum WM1 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstC4e-1168.9
NC_011244:213853:232495232495233403909Borrelia recurrentis A1, complete genomephosphate ABC transporter, permease protein9e-1167.8
NC_014171:723155:728371728371729261891Bacillus thuringiensis BMB171 chromosome, complete genomephosphate ABC transporter permease1e-1067.4
NC_010673:205500:219826219826220734909Borrelia hermsii DAH, complete genomephosphate transport system permease protein PstC3e-1066.2
NC_013665:1865122:188594018859401886803864Methanocella paludicola SANAE, complete genomephosphate ABC transporter permease protein3e-1065.9
NC_021175:845370:846248846248847165918Streptococcus oligofermentans AS 1.3089, complete genomephosphate ABC transporter permease4e-1065.9
NC_011565:385454:385454385454386347894Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,ABC-type phosphate transporter permease component PstC4e-1065.9
NC_009720:4367584:437746243774624378409948Xanthobacter autotrophicus Py2, complete genomephosphate ABC transporter, inner membrane subunit PstC5e-1065.5
NC_008701:195850:252356252356253198843Pyrobaculum islandicum DSM 4184, complete genomephosphate ABC transporter, permease protein5e-1065.1
NC_016048:375676:378289378289378990702Oscillibacter valericigenes Sjm18-20, complete genomeputative phosphate ABC transporter permease protein8e-1064.7
NC_020291:1389114:139953313995331400426894Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphate ABC transporter permease protein PstC7e-1064.7
NC_010525:285805:318965318965319843879Thermoproteus neutrophilus V24Sta, complete genomebinding-protein-dependent transport systems inner membrane component7e-1064.7
NC_009481:1109324:113541411354141136361948Synechococcus sp. WH 7803 chromosome, complete genomephosphate ABC transporter permease9e-1064.3
NC_007681:402773:402773402773403648876Methanosphaera stadtmanae DSM 3091, complete genomePstC1e-0963.9
NC_009633:4733678:473736347373634738295933Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphate ABC transporter permease7e-0961.6
NC_010003:2134878:213647821364782137344867Petrotoga mobilis SJ95, complete genomebinding-protein-dependent transport systems inner membrane component2e-0859.7
NC_015672:1921023:1922198192219819234421245Flexistipes sinusarabici DSM 4947 chromosome, complete genomephosphate ABC transporter inner membrane subunit PstC7e-0858.2
NC_009012:1934107:193498219349821935836855Clostridium thermocellum ATCC 27405, complete genomephosphate ABC transporter, inner membrane subunit PstC1e-0757.4
NC_015064:1984662:1985740198574019868011062Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate ABC transporter, inner membrane subunit PstC2e-0756.6
NC_010610:1385066:141395114139511414850900Lactobacillus fermentum IFO 3956, complete genomephosphate ABC transporter permease component3e-0755.8
NC_014830:3275474:3274470327447032754771008Intrasporangium calvum DSM 43043 chromosome, complete genomephosphate ABC transporter membrane protein 1, PhoT family4e-0755.5
NC_013526:911909:927620927620928579960Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomephosphate ABC transporter, inner membrane subunit PstC8e-0754.7
NC_014923:79370:856258562586512888Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completebinding-protein-dependent transport systems inner membrane component2e-0653.5
NC_008321:3815940:381770738177073818444738Shewanella sp. MR-4, complete genomemolybdate ABC transporter, inner membrane subunit2e-0653.5
NC_016027:346768:360059360059361036978Gluconacetobacter xylinus NBRC 3288, complete genomephosphate ABC transporter permease2e-0653.1
NC_004347:4007847:401081540108154011552738Shewanella oneidensis MR-1, complete genomemolybdate transport permease protein3e-0652.8
NC_013895:66641:847358473585628894Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completephosphate ABC transporter, permease protein PstC3e-0652.8
NC_015185:1114180:113733311373331138256924Desulfurobacterium thermolithotrophum DSM 11699 chromosome,phosphate ABC transporter, inner membrane subunit PstC4e-0652.4
NC_013194:1955582:197549519754951976445951Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completephosphate ABC transporter, inner membrane subunit PstC5e-0652
NC_013947:2351208:235529723552972356271975Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephosphate ABC transporter inner membrane subunit PstC5e-0652
NC_009659:2523874:2562889256288925639171029Janthinobacterium sp. Marseille chromosome, complete genomephosphate ABC transporter permease6e-0652
NC_002944:865425:896361896361897341981Mycobacterium avium subsp. paratuberculosis K-10, complete genomePstC2_27e-0651.6
NC_011146:1998981:200161120016112002441831Geobacter bemidjiensis Bem, complete genomesulfate ABC transporter, inner membrane subunit CysT8e-0651.2