Pre_GI: BLASTP Hits

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Query: NC_007492:3180480:3193884 Pseudomonas fluorescens PfO-1, complete genome

Start: 3193884, End: 3194315, Length: 432

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013895:605488:624083624083624568486Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, MarR family1e-22105
NC_012527:288207:297107297107297571465Deinococcus deserti VCD115 plasmid 1, complete sequencetranscriptional regulator, marR family4e-22103
NC_015677:3685452:368943436894343689940507Ramlibacter tataouinensis TTB310 chromosome, complete genometranscriptional regulator OhrR5e-22103
NC_016147:1672482:167701116770111677517507Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeMarR family transcriptional regulator4e-2199.8
NC_020064:79422:100794100794101252459Serratia marcescens FGI94, complete genometranscriptional regulator1e-1995.1
NC_013410:1152188:115273911527391153176438Fibrobacter succinogenes subsp. succinogenes S85 chromosome,transcriptional regulator, MarR family1e-1995.1
NC_009668:594500:621228621228621686459Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMarR family transcriptional regulator1e-1994.7
NC_020126:9938287:993828799382879938877591Myxococcus stipitatus DSM 14675, complete genomeMarR family transcriptional regulator4e-1993.6
NC_014483:1973233:199207719920771992547471Paenibacillus polymyxa E681 chromosome, complete genomeOrganic hydroperoxide resistance transcriptional regulator6e-1992.8
NC_003910:3448983:345124434512443451711468Colwellia psychrerythraea 34H, complete genometranscriptional regulator, MarR family3e-1890.5
NC_017191:467207:475062475062475499438Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator3e-1890.5
NC_017190:466236:473765473765474202438Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional regulator3e-1890.5
NC_017188:461177:469032469032469469438Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative transcriptional regulato3e-1890.5
NC_015391:2059191:206431520643152064788474Carnobacterium sp. 17-4 chromosome, complete genometranscriptional regulator sensing organic peroxides5e-1889.7
NC_003911:253400:274505274505274942438Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, MarR family7e-1889.4
NC_010407:151599:168819168819169256438Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative MarR-familiy transcriptional regulator2e-1787.4
NC_013971:3713000:371680637168063717273468Erwinia amylovora ATCC 49946 chromosome, complete genomeMarR family transcriptional regulator3e-1787
NC_013961:3709800:371654837165483717015468Erwinia amylovora, complete genomeHTH-type transcriptional regulator sarZ3e-1787
NC_003997:4273579:427532942753294275781453Bacillus anthracis str. Ames, complete genometranscriptional regulator, MarR family6e-1786.3
NC_014335:4181710:420604642060464206498453Bacillus cereus biovar anthracis str. CI chromosome, completeorganic hydroperoxide resistance transcriptional regulator6e-1786.3
NC_012472:4255729:428006142800614280513453Bacillus cereus 03BB102, complete genometranscriptional regulator, MarR family6e-1786.3
NC_011969:4140000:416324141632414163693453Bacillus cereus Q1 chromosome, complete genomeMarR family transcriptional regulator6e-1786.3
NC_012659:4273606:427535642753564275808453Bacillus anthracis str. A0248, complete genometranscriptional regulator, MarR family6e-1786.3
NC_016779:4217171:423290742329074233359453Bacillus cereus F837/76 chromosome, complete genomeOrganic hydroperoxide resistance transcriptional regulator6e-1786.3
NC_011773:4296082:431302943130294313481453Bacillus cereus AH820 chromosome, complete genomeMarR family transcriptional regulator6e-1786.3
NC_008600:4263505:428163042816304282112483Bacillus thuringiensis str. Al Hakam, complete genomeorganic hydroperoxide resistance transcriptional regulator, MarR family6e-1786.3
NC_015977:442493:467494467494467934441Roseburia hominis A2-183 chromosome, complete genomeMarR family transcriptional regulator5e-1786.3
NC_009633:2137999:215730021573002157731432Alkaliphilus metalliredigens QYMF chromosome, complete genomeMarR family transcriptional regulator5e-1786.3
NC_003909:4209385:422859642285964229048453Bacillus cereus ATCC 10987, complete genometranscriptional regulator, MarR family9e-1785.5
NC_020291:1149887:116904111690411169475435Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, MarR family2e-1684.7
NC_011772:4397599:441354244135424413994453Bacillus cereus G9842, complete genometranscriptional regulator, MarR family4e-1683.6
NC_004722:4405363:442122944212294421681453Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, MarR family4e-1683.6
NC_017208:4435573:445080544508054451257453Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMarR family transcriptional regulator5e-1683.2
NC_011725:4428726:444589444458944446346453Bacillus cereus B4264 chromosome, complete genomeMarR family transcriptional regulator6e-1682.8
NC_018000:2816637:283804728380472838550504Sinorhizobium fredii USDA 257 chromosome, complete genomeorganic hydroperoxide resistance transcriptional regulator7e-1682.4
NC_014171:4317520:433613843361384336590453Bacillus thuringiensis BMB171 chromosome, complete genomeMarR family transcriptional regulator9e-1682
NC_020207:1795993:180598618059861806426441Enterococcus faecium NRRL B-2354, complete genomeOrganic hydroperoxide resistance transcriptional regulator, MarR family1e-1581.6
NC_012721:2021885:204283520428352043287453Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, MarR family protein1e-1581.6
NC_012214:3931824:393735539373553937813459Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator of organic hydroperoxide resistance3e-1580.9
NC_004193:3578710:359614835961483596582435Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-1477.4
NC_017353:646195:663756663756664184429Staphylococcus lugdunensis N920143, complete genomeMarR family regulatory protein2e-1477.4
NC_014306:4901390:490332449033244903782459Erwinia billingiae Eb661, complete genomeTranscriptional regulator of organic hydroperoxide resistance3e-1477
NC_007712:3511500:352399535239953524432438Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator3e-1477
NC_017955:3670670:370356137035613703920360Modestobacter marinus, complete genomeorganic hydroperoxide resistance transcriptional regulator4e-1476.6
NC_007168:195638:212376212376212816441Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein5e-1476.3
NC_013929:5927935:592793559279355928609675Streptomyces scabiei 87.22 chromosome, complete genomeMarR family transcriptional regulator7e-1475.9
NC_010611:679862:681926681926682363438Acinetobacter baumannii ACICU, complete genomeTranscriptional regulator1e-1375.5
NC_010410:3166279:318213331821333182570438Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (MarR family)1e-1375.1
NC_002953:2435667:243566724356672436113447Staphylococcus aureus subsp. aureus MSSA476, complete genomeMarR family regulatory protein2e-1270.9
NC_007168:665284:685098685098685541444Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-1270.5
NC_019842:484933:505161505161505475315Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,HTH-type transcriptional regulator1e-0755.1
NC_009725:496443:509723509723510037315Bacillus amyloliquefaciens FZB42, complete genomeputative transcriptional regulato2e-0754.3
NC_018720:627642:643708643708644157450Bifidobacterium asteroides PRL2011 chromosome, complete genometranscriptional regulator, MarR family2e-0754.3
NC_020410:495184:508552508552508842291Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative transcriptional regulato3e-0753.9
NC_016935:1636278:172678517267851727288504Paenibacillus mucilaginosus 3016 chromosome, complete genomeMarR family transcriptional regulator6e-0752.8
NC_019903:1058657:106200710620071062462456Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transcriptional regulator9e-0752.4
NC_008781:1507384:153205115320511532587537Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, MarR family2e-0650.8
NC_015690:1109335:115982311598231160200378Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMarR family transcriptional regulator5e-0650.1