Pre_GI: BLASTP Hits

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Query: NC_007492:2035761:2035761 Pseudomonas fluorescens PfO-1, complete genome

Start: 2035761, End: 2037203, Length: 1443

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:2185907:2186515218651521879571443Pseudomonas syringae pv. tomato str. DC3000, complete genomecytochrome c oxidase, cbb3-type, subunit I0854
NC_005773:3851433:3866057386605738674991443Pseudomonas syringae pv. phaseolicola 1448A, complete genomecytochrome c oxidase, cbb3-type, subunit I0853
NC_007005:4062311:4077945407794540793871443Pseudomonas syringae pv. syringae B728a, complete genomeCytochrome c oxidase cbb3-type, subunit I0853
NC_012560:1965251:1987420198742019888621443Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit I0848
NC_021150:1965264:1987433198743319888751443Azotobacter vinelandii CA6, complete genomecbb3-type cytochrome c oxidase subunit I0848
NC_007492:2035761:2039457203945720408811425Pseudomonas fluorescens PfO-1, complete genomeCytochrome c oxidase cbb3-type, subunit I0825
NC_014541:2122788:2135700213570021371301431Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit I0764
NC_009092:2282437:2297760229776022991871428Shewanella loihica PV-4, complete genomecytochrome c oxidase, cbb3-type, subunit I0747
NC_016901:2594942:2594942259494225963781437Shewanella baltica OS678 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit I0747
NC_009997:2635025:2635025263502526364611437Shewanella baltica OS195, complete genomecytochrome c oxidase, cbb3-type, subunit I0747
NC_009052:2512373:2547126254712625485621437Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit I0747
NC_016602:1994110:1994110199411019955371428Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecytochrome c oxidase, Cbb3-type, subunit I0743
NC_009379:435404:4459844459844474261443Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit I0723
NC_008702:1432952:1460596146059614620201425Azoarcus sp. BH72, complete genomeprobable cytochrome c oxidase, cbb3-type,subunit I0717
NC_016745:2229271:2234039223403922353761338Oceanimonas sp. GK1 chromosome, complete genomecbb3-type cytochrome c oxidase subunit I0709
NC_014910:3458475:3472486347248634739251440Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i0708
NC_015422:1163752:1170428117042811718671440Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit I0708
NC_007298:778723:7835877835877850141428Dechloromonas aromatica RCB, complete genomeCytochrome c oxidase cbb3-type, subunit I0701
NC_011992:1038985:1042150104215010435891440Acidovorax ebreus TPSY, complete genomecytochrome c oxidase, cbb3-type, subunit I0697
NC_008782:1136732:1139894113989411413331440Acidovorax sp. JS42, complete genomecytochrome c oxidase, cbb3-type, subunit I0697
NC_013422:2004478:2015536201553620169961461Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit I9e-171600
NC_012848:320883:3426373426373442591623Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,cytochrome c oxidase, cbb3-type, subunit I7e-168590
NC_008095:6877388:6889429688942968918102382Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit I/II6e-163574
NC_020126:7896447:7918373791837379207332361Myxococcus stipitatus DSM 14675, complete genomebifunctional cbb3-type cytochrome c oxidase subunit I/II1e-162573
NC_009465:29735:3979839798412161419Candidatus Vesicomyosocius okutanii HA, complete genomecbb3-type cytochrome c oxidase subunit I7e-160563
NC_014934:2223822:2223822222382222260202199Cellulophaga algicola DSM 14237 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i1e-157556
NC_010118:133256:1469581469581491682211Candidatus Sulcia muelleri GWSS, complete genomebifunctional cytochrome c oxidase subunits ccoN/O3e-125449
NC_014166:3072703:3080775308077530822411467Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecbb3-type cytochrome c oxidase subunit I7e-120431
NC_009714:1329573:1332880133288013343461467Campylobacter hominis ATCC BAA-381, complete genomecbb3-type cytochrome c oxidase subunit I4e-116418
NC_011146:1429836:1432591143259114339941404Geobacter bemidjiensis Bem, complete genomecytochrome c oxidase subunit I4e-112405
NC_020541:1827689:1845788184578818474041617Rhodanobacter sp. 2APBS1, complete genomeCbb3-type cytochrome oxidase, subunit 18e-55214
NC_006513:1695487:1716225171622517178531629Azoarcus sp. EbN1, complete genomecytochrome C oxidase subunit transmembrane protein9e-52204
NC_015458:1938860:1939570193957019412191650Pusillimonas sp. T7-7 chromosome, complete genomecytochrome C oxidase subunit transmembrane protein8e-51201
NC_012856:2266187:2266187226618722678391653Ralstonia pickettii 12D chromosome 1, complete genomeCytochrome-c oxidase2e-50200
NC_012440:373863:3738633738633752541392Persephonella marina EX-H1, complete genomeputative cytochrome c oxidase, subunit I3e-38159
NC_012660:2045398:2066634206663420680311398Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C subunit protein4e-33143
NC_010547:31444:5220552205539291725Cyanothece sp. ATCC 51142 chromosome linear, complete sequencecytochrome c oxidase subunit I3e-1067
NC_008312:409830:4282934282934299811689Trichodesmium erythraeum IMS101, complete genomeCytochrome-c oxidase1e-0965.1
NC_013730:6901725:6910170691017069120531884Spirosoma linguale DSM 74, complete genomeCytochrome-c oxidase6e-0962.8
NC_015914:2658845:2668167266816726700591893Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit I2e-0861.2
NC_014655:2366201:2390772239077223926341863Leadbetterella byssophila DSM 17132 chromosome, complete genomecytochrome c oxidase subunit i8e-0858.9
NC_011884:1029328:1047387104738710491501764Cyanothece sp. PCC 7425, complete genomecytochrome c oxidase, subunit I9e-0858.5
NC_020054:1335699:1345346134534613472321887Fibrella aestuarina BUZ 2 drat genomeCytochrome-c oxidase2e-0757.8
NC_008699:1673181:1720885172088517225701686Nocardioides sp. JS614, complete genomecytochrome c oxidase, subunit I7e-0755.8
NC_015703:3444025:3452488345248834543681881Runella slithyformis DSM 19594 chromosome, complete genomecytochrome c oxidase subunit I1e-0655.1
NC_005125:760721:7916257916257932891665Gloeobacter violaceus PCC 7421, complete genomecytochrome c oxidase subunit I2e-0654.7
NC_012791:721813:7549587549587569461989Variovorax paradoxus S110 chromosome 1, complete genomecytochrome c oxidase, subunit I2e-0654.3
NC_014012:207289:2246392246392262341596Shewanella violacea DSS12, complete genomecytochrome c oxidase, subunit I8e-0652.4
NC_015387:1965711:1974426197442619761741749Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase, subunit I8e-0652.4