Pre_GI: BLASTP Hits

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Query: NC_006347:4378684:4391388 Bacteroides fragilis YCH46, complete genome

Start: 4391388, End: 4393211, Length: 1824

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015160:2002570:2020601202060120217281128Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, AraC family5e-1169.7
NC_015160:612000:6163696163696174931125Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, AraC family2e-1067.8
NC_014392:1935130:1938889193888919412162328Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, AraC family2e-0964.7
NC_014657:1775929:1794243179424317965702328Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, arac family2e-0964.3
NC_009328:3322802:3356777335677733578771101Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter permease3e-0963.9
NC_015520:2821406:2821406282140628230011596Mahella australiensis 50-1 BON chromosome, complete genomeAraC family two component transcriptional regulator5e-0963.5
NC_018870:354164:3720013720013733231323Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulator, AraC family5e-0963.2
NC_016584:5625975:562765656276565628420765Desulfosporosinus orientis DSM 765 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain7e-0962.8
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator1e-0862
NC_020054:4161049:419729541972954198161867Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family3e-0860.5
NC_016935:2918689:2941139294113929427611623Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0860.5
NC_012914:5446366:5444810544481054463691560Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family5e-0860.1
NC_015152:2549756:2614251261425126158431593Spirochaeta sp. Buddy chromosome, complete genomeAraC family transcriptional regulator7e-0859.7
NC_013406:5066769:5115620511562051179922373Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator8e-0859.3
NC_015690:2039215:2055816205581620574321617Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYijO8e-0859.3
NC_016935:2567039:2605104260510426067201617Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein7e-0859.3
NC_020134:2832857:2831257283125728328791623Clostridium stercorarium subsp. stercorarium DSM 8532, completeTwo component transcriptional regulator, AraC family1e-0758.9
NC_014484:447889:4708174708174730332217Spirochaeta thermophila DSM 6192 chromosome, complete genometranscriptional regulator, AraC family1e-0758.9
NC_016935:4233223:4266322426632242686402319Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0758.9
NC_015690:4469775:4511939451193945142572319Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-0758.9
NC_015275:309133:3217793217793240432265Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, AraC family1e-0758.5
NC_009922:2556033:258372525837252584486762Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, AraC family3e-0757.4
NC_015519:488550:5070285070285086411614Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family two component transcriptional regulator3e-0757.4
NC_009012:1901492:191352319135231914302780Clostridium thermocellum ATCC 27405, complete genometwo component transcriptional regulator, AraC family3e-0757.4
NC_015436:1287873:128864712886471289450804Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, AraC family4e-0757
NC_008593:1859861:1881113188111318822881176Clostridium novyi NT, complete genometranscriptional regulator, araC family protein4e-0757
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator6e-0756.6
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein6e-0756.6
NC_016593:2015321:2023626202362620248311206Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTwo component transcriptional regulator, AraC5e-0756.6
NC_015733:2963548:296354829635482964501954Pseudomonas putida S16 chromosome, complete genometranscriptional regulator5e-0756.6
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family8e-0756.2
NC_015690:1726000:1761079176107917627251647Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator1e-0655.8
NC_016935:2256000:2291119229111922927651647Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0655.8
NC_012778:1778654:178268317826831783558876Eubacterium eligens ATCC 27750, complete genomeAraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR2e-0655.1
NC_008543:2220698:225640822564082257346939Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-0655.1
NC_008061:190287:222318222318223256939Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-0655.1
NC_010515:2111691:214664121466412147621981Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0654.7
NC_012912:4071859:408833840883384089192855Dickeya zeae Ech1591, complete genometranscriptional regulator, AraC family2e-0654.7
NC_010170:4463000:447239344723934473199807Bordetella petrii, complete genometranscriptional regulator, AraC family2e-0654.7
NC_014933:364463:3691783691783703201143Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family3e-0654.3
NC_013132:1652477:165247716524771653346870Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0654.3
NC_009437:2889466:2910212291021229125812370Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehelix-turn-helix domain-containing protein4e-0653.9
NC_016631:6081384:609364760936476094531885Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator3e-0653.9
NC_010473:498252:522236522236522985750Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; DNA-binding transcriptional activator3e-0653.9
NC_010473:623810:635496635496636245750Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; DNA-binding transcriptional activator3e-0653.9
NC_011751:680417:689047689047689796750Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional activator; DLP12 prophage3e-0653.9
AC_000091:558920:582904582904583653750Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional activator3e-0653.9
NC_000913:558920:582904582904583653750Escherichia coli K12, complete genomeDLP12 prophage; DNA-binding transcriptional activator3e-0653.9
NC_012759:461680:485664485664486413750Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; DNA-binding transcriptional activator3e-0653.9
NC_014206:1694330:1703164170316417043721209Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator4e-0653.5
NC_014933:1759729:178259217825921783479888Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family5e-0653.5
NC_021184:3149000:316585831658583166829972Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain5e-0653.5