Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2220560 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2220560, End: 2220736, Length: 177

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014366:478000:491210491210491434225Gamma proteobacterium HdN1, complete genomeExcisionase, phage related8e-1475.9
NC_015186:491930:512700512700512894195Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-1375.1
NC_016112:364723:368711368711368905195Methylomicrobium alcaliphilum chromosome, complete genomeexcisionase2e-1374.3
NC_009052:5089963:509377650937765094000225Shewanella baltica OS155, complete genomeputative transcriptional regulator3e-1373.9
NC_008752:166877:171086171086171298213Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA binding domain, excisionase family7e-1372.4
NC_015422:1876102:189556018955601895760201Alicycliphilus denitrificans K601 chromosome, complete genomeexcisionase family DNA binding domain-containing protein9e-1372
NC_008463:1293079:131714813171481317348201Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-1271.6
NC_008782:2683989:269945626994562699656201Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA1e-1271.6
NC_007645:3581114:360687036068703607079210Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator2e-1270.9
NC_011662:1041725:104648610464861046695210Thauera sp. MZ1T, complete genomeexcision promoter, Xis3e-1270.5
NC_010084:2484000:249887624988762499157282Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA binding domain-containing protein2e-1167.8
NC_010804:996837:102561610256161025897282Burkholderia multivorans ATCC 17616 chromosome 1, completeputative excisionase2e-1167.8
NC_016616:1534983:155261115526111552883273Dechlorosoma suillum PS chromosome, complete genomeexcisionase family DNA-binding2e-1167.4
NC_020260:882307:910527910527910808282Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator4e-1167
NC_015500:1923514:196319519631951963845651Treponema brennaborense DSM 12168 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN6e-0959.7
NC_013890:191616:202464202464202646183Dehalococcoides sp. GT chromosome, complete genomeDNA binding domain protein, excisionase family1e-0858.5
NC_002928:1351750:135796613579661358127162Bordetella parapertussis 12822, complete genomehypothetical protein2e-0858.2
NC_014844:1773424:178791317879131788101189Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein2e-0857.4
NC_009455:173374:191300191300191470171Dehalococcoides sp. BAV1 chromosome, complete genome3e-0857
NC_014484:447889:449153449153449854702Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein8e-0855.8
NC_008578:889907:895710895710895892183Acidothermus cellulolyticus 11B, complete genomeDNA binding domain, excisionase family2e-0754.7
NC_014314:238043:278609278609279148540Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeresponse regulator receiver protein2e-0754.3
NC_015578:3410367:342253734225373422725189Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-0753.9
NC_014972:2371647:239778823977882398699912Desulfobulbus propionicus DSM 2032 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein7e-0649.3