Pre_GI: BLASTP Hits

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Query: NC_005126:2756984:2766027 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 2766027, End: 2766812, Length: 786

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1317602:133868613386861339459774Photorhabdus asymbiotica, complete genomehypothetical protein6e-138489
NC_009831:1539159:156018715601871560951765Shewanella sediminis HAW-EB3, complete genomehypothetical protein2e-34146
NC_015737:1976000:200118720011872001960774Clostridium sp. SY8519, complete genomehypothetical protein7e-32137
NC_015976:2064387:206953120695312070496966Sphingobium sp. SYK-6, complete genomehypothetical protein5e-1994.7
NC_011979:1062457:106823410682341068710477Geobacter sp. FRC-32, complete genomeprotein of unknown function DUF14861e-1067
NC_011001:2085986:214447721444772144956480Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative cyclase1e-0860.8
NC_007511:1147696:114873411487341149210477Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-0860.1
NC_010334:2615260:262486326248632625066204Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein4e-0652