Pre_GI: BLASTP Hits

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Query: NC_004547:2810151:2814296 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2814296, End: 2815513, Length: 1218

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014972:3688000:3688057368805736892801224Desulfobulbus propionicus DSM 2032 chromosome, complete genomediguanylate phosphodiesterase3e-59229
NC_014614:6115:88628862100791218Clostridium sticklandii, complete genomeputative phosphodiesterase2e-50200
NC_011901:342777:3650433650433662541212Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completesignal transduction protein7e-46184
NC_006322:3198829:3211668321166832128881221Bacillus licheniformis ATCC 14580, complete genomeYuxH4e-44179
NC_016803:2431672:2431672243167224329221251Desulfovibrio desulfuricans ND132 chromosome, complete genomediguanylate phosphodiesterase2e-43177
NC_002505:514732:5471585471585483901233Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-41169
NC_012668:62500:7195071950731821233Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein4e-41169
NC_016445:2938887:2958194295819429594261233Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-41169
NC_013223:2279869:2285460228546022867041245Desulfohalobium retbaense DSM 5692, complete genomediguanylate phosphodiesterase6e-39161
NC_018704:176088:1784791784791797171239Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein4e-35149
NC_015731:990000:1010125101012510113631239Nitrosomonas sp. Is79A3 chromosome, complete genomediguanylate phosphodiesterase with metal dependent hydrolase domain9e-35148
NC_015222:1607757:1618718161871816199561239Nitrosomonas sp. AL212 chromosome, complete genomediguanylate phosphodiesterase metal dependent hydrolase domain2e-33144
NC_016616:3585435:3585435358543535866971263Dechlorosoma suillum PS chromosome, complete genomeputative signal transduction protein containing EAL and modified HD-GYP domains2e-33143
NC_012721:2406874:2424528242452824256821155Burkholderia glumae BGR1 chromosome 2, complete genomeDiguanylate phosphodiesterase5e-1995.9
NC_010730:1519458:1523191152319115244021212Sulfurihydrogenibium sp. YO3AOP1, complete genomeputative signal transduction protein8e-1892
NC_012724:2611000:2612949261294926141811233Burkholderia glumae BGR1 chromosome 1, complete genomeDiguanylate phosphodiesterase5e-1789.4
NC_016002:1048420:1051518105151810529331416Pseudogulbenkiania sp. NH8B, complete genomeputative signal transduction protein7e-1479
NC_010678:114000:1299081299081320792172Ralstonia pickettii 12J chromosome 2, complete sequencePTS system, lactose/cellobiose family IIC subunit4e-0963.2
NC_012857:557911:5737025737025758732172Ralstonia pickettii 12D chromosome 2, complete genomePTS system, lactose/cellobiose family IIC subunit4e-0963.2
NC_014837:2586870:2597255259725525984661212Pantoea sp. At-9b chromosome, complete genomediguanylate phosphodiesterase2e-0860.5
NC_014624:2297000:2321790232179023240062217Eubacterium limosum KIST612 chromosome, complete genomeputative signaling protein3e-0860.1
NC_016514:2079975:209105720910572091857801Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcgG3e-0757
NC_013205:1187812:123350212335021234110609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,diguanylate phosphodiesterase5e-0755.8
NC_012438:192065:2034542034542053701917Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomediguanylate cyclase/phosphodiesterase8e-0755.1
NC_020063:2230000:2241541224154122427611221Enterobacteriaceae bacterium strain FGI 57, complete genomeEAL domain-containing protein2e-0653.9
NC_014618:2989000:2996112299611229976261515Enterobacter cloacae SCF1 chromosome, complete genomediguanylate phosphodiesterase3e-0653.1