Pre_GI: BLASTP Hits

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Query: NC_004129:4993974:4997821 Pseudomonas fluorescens Pf-5, complete genome

Start: 4997821, End: 4998672, Length: 852

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015458:2441435:246205824620582462909852Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein6e-131466
NC_009668:46010:584575845759317861Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein1e-61236
NC_010511:2703684:274098327409832741852870Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein3e-58225
NC_008578:1827605:183393718339371834560624Acidothermus cellulolyticus 11B, complete genomehypothetical protein4e-2098.6
NC_010725:2589014:259107225910722591668597Methylobacterium populi BJ001, complete genomehypothetical protein6e-1065.1
NC_007958:2423335:244146124414612442096636Rhodopseudomonas palustris BisB5, complete genomehypothetical protein7e-1064.7
NC_015379:1600715:162383116238311624472642Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative urea carboxylase-associated protein 12e-0963.2
NC_013956:4490000:450966145096614510353693Pantoea ananatis LMG 20103 chromosome, complete genomeYcgI3e-0962.8
NC_016817:185000:210121210121210756636Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceurea carboxylase-associated protein 13e-0962.4
NC_007958:2423335:244061624406162441458843Rhodopseudomonas palustris BisB5, complete genomehypothetical protein6e-0961.6
NC_007494:867901:871139871139871753615Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein1e-0757.4
NC_008343:2050000:2054402205440220563001899Granulibacter bethesdensis CGDNIH1, complete genomeaminomethyltransferase family protein1e-0757
NC_011958:923789:926208926208926849642Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein3e-0755.8
NC_017506:3717261:372636237263623726922561Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein4e-0755.8
NC_007520:1940120:196125119612511961895645Thiomicrospira crunogena XCL-2, complete genomehypothetical protein1e-0653.9