Pre_GI: BLASTP Hits

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Query: NC_003198:2179688:2194299 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 2194299, End: 2194718, Length: 420

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:799810:809218809218809637420Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein9e-79291
NC_011147:792489:801872801872802291420Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-76281
NC_006511:792543:801926801926802345420Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-76281
NC_012125:1632150:164155616415561641975420Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-75279
NC_006905:2235607:225123822512382251657420Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein5e-75279
NC_013282:2026083:204362220436222044029408Cronobacter turicensis, complete genomehypothetical protein2e-1787.4
NC_017060:125480:137560137560138009450Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein6e-0959.3
NC_015062:130359:140730140730141179450Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein6e-0959.3