Pre_GI: BLASTP Hits

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Query: NC_001263:243000:262878 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 262878, End: 263456, Length: 579

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012589:842270:856945856945857379435Sulfolobus islandicus L.S.2.15, complete genomeNUDIX hydrolase6e-1167.4
NC_007777:3000941:300957130095713010002432Frankia sp. CcI3, complete genomeNUDIX hydrolase1e-0756.6
NC_007777:3824291:383269638326963833229534Frankia sp. CcI3, complete genomeNUDIX hydrolase1e-0755.8
NC_016887:2269177:228193322819332282316384Nocardia cyriacigeorgica GUH-2, complete genomeNUDIX hydrolase4e-0754.3
NC_007777:1018824:104178610417861042223438Frankia sp. CcI3, complete genomeNUDIX hydrolase5e-0754.3
NC_003155:320979:322432322432322938507Streptomyces avermitilis MA-4680, complete genomeMutT-family protein3e-0651.6
NC_007005:4857768:487748148774814878431951Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-0651.6
NC_016111:4207110:421322942132294213759531Streptomyces cattleya NRRL 8057, complete genomeMutT-family protein4e-0651.2
NC_004578:4940000:496169949616994962649951Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0550.1